RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 ARHGAP33O14559 1287 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 MMP20O60882 483 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 MX2P20592 715 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 CLDN2P57739 230 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 HNRNPDQ14103 355 aaKnown RBP22.11■■□□□ 1.13
GFRA3-202ENST00000378362 KIF19Q2TAC6 998 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 CFAP58Q5T655 872 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 ADAT2Q7Z6V5 191 aaKnown RBP22.11■■□□□ 1.13
GFRA3-202ENST00000378362 PRPF39Q86UA1 669 aaKnown RBP22.11■■□□□ 1.13
GFRA3-202ENST00000378362 TEX26Q8N6G2 289 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 MAML1Q92585 1016 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 HDAC11Q96DB2 347 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 OLFM3Q96PB7 478 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 KDM4CQ9H3R0 1056 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 PCDH12Q9NPG4 1184 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 SUSD2Q9UGT4 822 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 COQ6Q9Y2Z9 468 aa22.11■■□□□ 1.13
GFRA3-202ENST00000378362 TRAFD1O14545 582 aaPredicted RBP22.1■■□□□ 1.13
GFRA3-202ENST00000378362 XPAP23025 273 aaPredicted RBP22.1■■□□□ 1.13
GFRA3-202ENST00000378362 CTNNA2P26232 953 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 SERPINA4P29622 427 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 HOXD12P35452 270 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 CSNK1DP48730 415 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 RENBPP51606 427 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 AFF3P51826 1226 aaKnown RBP22.1■■□□□ 1.13
GFRA3-202ENST00000378362 RWDD2BP57060 319 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 PPIDQ08752 370 aaKnown RBP22.1■■□□□ 1.13
GFRA3-202ENST00000378362 CCDC15Q0P6D6 951 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 TRAF2Q12933 501 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 UGP2Q16851 508 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 TRIM69Q86WT6 500 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 VSIG1Q86XK7 387 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 LRRC49Q8IUZ0 686 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 CNTD1Q8N815 330 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 RBM41Q96IZ5 413 aaKnown RBP22.1■■□□□ 1.13
GFRA3-202ENST00000378362 NUDCD1Q96RS6 583 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 KCNF1Q9H3M0 494 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 SNX11Q9Y5W9 270 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 PCNX2A6NKB5 2137 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 DCDC2BA2VCK2 349 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 F5H423 210 aaPredicted RBP22.1■■□□□ 1.13
GFRA3-202ENST00000378362 AREL1O15033 823 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 RAD51BO15315 384 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 DDX3YO15523 660 aaKnown RBP22.1■■□□□ 1.13
GFRA3-202ENST00000378362 NEBLO76041 1014 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 CCDC175P0C221 793 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 ZFXP17010 805 aaPredicted RBP22.1■■□□□ 1.13
GFRA3-202ENST00000378362 ATXN3P54252 364 aaPredicted RBP22.1■■□□□ 1.13
GFRA3-202ENST00000378362 FAM193AP78312 1265 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 NIPAL4Q0D2K0 466 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 TFDP2Q14188 446 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 TIGD7Q6NT04 549 aaPredicted RBP22.1■■□□□ 1.13
GFRA3-202ENST00000378362 TXLNBQ8N3L3 684 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 FEM1CQ96JP0 617 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 AGAP3Q96P47 875 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 ANKRD6Q9Y2G4 727 aa22.1■■□□□ 1.13
GFRA3-202ENST00000378362 CCDC66A2RUB6 948 aa22.09■■□□□ 1.13
GFRA3-202ENST00000378362 KRT86O43790 486 aa22.09■■□□□ 1.13
GFRA3-202ENST00000378362 PDK1Q15118 436 aa22.09■■□□□ 1.13
GFRA3-202ENST00000378362 TMEM259Q4ZIN3 620 aa22.09■■□□□ 1.13
GFRA3-202ENST00000378362 BBS5Q8N3I7 341 aa22.09■■□□□ 1.13
GFRA3-202ENST00000378362 MINDY1Q8N5J2 469 aa22.09■■□□□ 1.13
GFRA3-202ENST00000378362 ZNF641Q96N77 438 aaPredicted RBP22.09■■□□□ 1.13
GFRA3-202ENST00000378362 OSBPL8Q9BZF1 889 aa22.09■■□□□ 1.13
GFRA3-202ENST00000378362 DKK3Q9UBP4 350 aa22.09■■□□□ 1.13
GFRA3-202ENST00000378362 CDV3Q9UKY7 258 aaKnown RBP22.09■■□□□ 1.13
GFRA3-202ENST00000378362 PPP2R2CQ9Y2T4 447 aa22.09■■□□□ 1.13
GFRA3-202ENST00000378362 PCDHB9Q9Y5E1 797 aa22.09■■□□□ 1.13
GFRA3-202ENST00000378362 TP53BP1Q12888 1972 aaPredicted RBP22.09■■□□□ 1.13
GFRA3-202ENST00000378362 PTMAP06454 111 aaKnown RBP22.08■■□□□ 1.13
GFRA3-202ENST00000378362 PDHA1P08559 390 aa22.08■■□□□ 1.13
GFRA3-202ENST00000378362 AP1S1P61966 158 aa22.08■■□□□ 1.13
GFRA3-202ENST00000378362 RACK1P63244 317 aaKnown RBP22.08■■□□□ 1.13
GFRA3-202ENST00000378362 CCDC181Q5TID7 509 aa22.08■■□□□ 1.13
GFRA3-202ENST00000378362 P3H4Q92791 437 aa22.08■■□□□ 1.13
GFRA3-202ENST00000378362 TUBGCP5Q96RT8 1024 aa22.08■■□□□ 1.13
GFRA3-202ENST00000378362 SLC17A9Q9BYT1 436 aa22.08■■□□□ 1.13
GFRA3-202ENST00000378362 TMEM9BQ9NQ34 198 aa22.08■■□□□ 1.13
GFRA3-202ENST00000378362 UPK3BL1B0FP48 263 aa22.08■■□□□ 1.12
GFRA3-202ENST00000378362 UPK3BL2E5RIL1 263 aa22.08■■□□□ 1.12
GFRA3-202ENST00000378362 DPP6P42658 865 aa22.08■■□□□ 1.12
GFRA3-202ENST00000378362 RPS21P63220 83 aaKnown RBP22.08■■□□□ 1.12
GFRA3-202ENST00000378362 SETMARQ53H47 684 aaPredicted RBP22.08■■□□□ 1.12
GFRA3-202ENST00000378362 KDELC2Q7Z4H8 507 aa22.08■■□□□ 1.12
GFRA3-202ENST00000378362 SYCE1Q8N0S2 351 aa22.08■■□□□ 1.12
GFRA3-202ENST00000378362 RNF10Q8N5U6 811 aaKnown RBP22.08■■□□□ 1.12
GFRA3-202ENST00000378362 CALR3Q96L12 384 aaKnown RBP22.08■■□□□ 1.12
GFRA3-202ENST00000378362 TSGA10Q9BZW7 698 aa22.08■■□□□ 1.12
GFRA3-202ENST00000378362 POLR1EQ9GZS1 481 aaKnown RBP22.08■■□□□ 1.12
GFRA3-202ENST00000378362 CACNA1AO00555 2505 aa22.07■■□□□ 1.12
GFRA3-202ENST00000378362 AP1G1O43747 822 aa22.07■■□□□ 1.12
GFRA3-202ENST00000378362 KCNA4P22459 653 aa22.07■■□□□ 1.12
GFRA3-202ENST00000378362 CD38P28907 300 aa22.07■■□□□ 1.12
GFRA3-202ENST00000378362 IL9RQ01113 521 aa22.07■■□□□ 1.12
GFRA3-202ENST00000378362 HLA-BQ31612 363 aa22.07■■□□□ 1.12
GFRA3-202ENST00000378362 ARRDC2Q8TBH0 407 aa22.07■■□□□ 1.12
GFRA3-202ENST00000378362 RAB7BQ96AH8 199 aa22.07■■□□□ 1.12
GFRA3-202ENST00000378362 ECHDC3Q96DC8 303 aa22.07■■□□□ 1.12
GFRA3-202ENST00000378362 GAREM1Q9H706 876 aa22.07■■□□□ 1.12
GFRA3-202ENST00000378362 RAI2Q9Y5P3 530 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms