RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 USP46P62068 366 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 NAB1Q13506 487 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 PERM1Q5SV97 790 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 CCDC54Q8NEL0 328 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 OR5M3Q8NGP4 307 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 ARMC5Q96C12 935 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 FAIM2Q9BWQ8 316 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 PCDHA3Q9Y5H8 950 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 ZSCAN5CA6NGD5 496 aaPredicted RBP16.42■□□□□ 0.22
RGP1-201ENST00000378078 A8MUA0 341 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 RGS20O76081 388 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 PROSCO94903 275 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 SP140Q13342 867 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 DEFB115Q30KQ5 88 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 NOMO2Q5JPE7 1267 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.42■□□□□ 0.22
RGP1-201ENST00000378078 TRMT2AQ8IZ69 625 aaKnown RBP16.42■□□□□ 0.22
RGP1-201ENST00000378078 DNASE1L2Q92874 299 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 GANQ9H2C0 597 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 PTPRAP18433 802 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 SREBF1P36956 1147 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 MRPS6P82932 125 aaKnown RBP16.42■□□□□ 0.22
RGP1-201ENST00000378078 MBTD1Q05BQ5 628 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 CARTPTQ16568 116 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 MZT2AQ6P582 158 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 RUBCNQ92622 972 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 LMAN2LQ9H0V9 348 aa16.42■□□□□ 0.22
RGP1-201ENST00000378078 PABPC3Q9H361 631 aaKnown RBP16.42■□□□□ 0.22
RGP1-201ENST00000378078 POLR3HQ9Y535 204 aaPredicted RBP16.42■□□□□ 0.22
RGP1-201ENST00000378078 CEP152O94986 1710 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 GLI2P10070 1586 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 BMP7P18075 431 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 SP3Q02447 781 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 SPANXN2Q5MJ10 180 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 STXBP5Q5T5C0 1151 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 XRRA1Q6P2D8 792 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 TEX47Q8TBZ9 253 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 PHF10Q8WUB8 498 aaKnown RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 SGK2Q9HBY8 427 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 KANSL1LA0AUZ9 987 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 CACNB4O00305 520 aaPredicted RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 RIPK2O43353 540 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 STBD1O95210 358 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 FCGR1AP12314 374 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 RPL21P46778 160 aaKnown RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 TOP3AQ13472 1001 aaPredicted RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 MED22Q15528 200 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 LINGO4Q6UY18 593 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 ZFPM1Q8IX07 1006 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 HTATIP2Q9BUP3 242 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 MROH7Q68CQ1 1323 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 FSBPO95073 299 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 PIGNO95427 931 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 RLN1P04808 185 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 CNTFP26441 200 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 CHAF1BQ13112 559 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 Q4G0T1 1027 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 INTS5Q6P9B9 1019 aaKnown RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 ARHGAP36Q6ZRI8 547 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 ABRAQ8N0Z2 381 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 KLHL32Q96NJ5 620 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 SEMA4AQ9H3S1 761 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 GSTK1Q9Y2Q3 226 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 MTF2Q9Y483 593 aaPredicted RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 CBX6O95503 412 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 GNALP38405 381 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 RBM43Q6ZSC3 357 aaKnown RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 METTL21AQ8WXB1 218 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 FATE1Q969F0 183 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 CFAP97Q9P2B7 532 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 CLTCQ00610 1675 aaKnown RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 MSI1O43347 362 aaKnown RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 STATHP02808 62 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 SLC12A3P55017 1021 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 FAM81AQ8TBF8 368 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 OXNAD1Q96HP4 312 aaPredicted RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 ZDHHC15Q96MV8 337 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 SPATA9Q9BWV2 254 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 CXorf56Q9H5V9 222 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 TPRKBQ9Y3C4 175 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 MYL9P24844 172 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 MSX1P28360 303 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 DUSP4Q13115 394 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 PABPC1LQ4VXU2 614 aaKnown RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 PTGR2Q8N8N7 351 aaPredicted RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 OR8D1Q8WZ84 308 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 LINGO1Q96FE5 620 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 SLC38A2Q96QD8 506 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 INTS10Q9NVR2 710 aaKnown RBP16.41■□□□□ 0.22
RGP1-201ENST00000378078 SLC27A6Q9Y2P4 619 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 PCDHAC2Q9Y5I4 1007 aa16.41■□□□□ 0.22
RGP1-201ENST00000378078 MAGEB16A2A368 324 aa16.4■□□□□ 0.22
RGP1-201ENST00000378078 F8VP50 259 aa16.4■□□□□ 0.22
RGP1-201ENST00000378078 FKTNO75072 461 aa16.4■□□□□ 0.22
RGP1-201ENST00000378078 SIN3BO75182 1162 aa16.4■□□□□ 0.22
RGP1-201ENST00000378078 LYNP07948 512 aa16.4■□□□□ 0.22
RGP1-201ENST00000378078 DGUOKQ16854 277 aa16.4■□□□□ 0.22
RGP1-201ENST00000378078 UBE2R2Q712K3 238 aaPredicted RBP16.4■□□□□ 0.22
RGP1-201ENST00000378078 ATCAYQ86WG3 371 aa16.4■□□□□ 0.22
RGP1-201ENST00000378078 ZNF540Q8NDQ6 660 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms