RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SKOR1P84550 965 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 PDE1CQ14123 709 aaPredicted RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 MAP3K21Q5TCX8 1036 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 SLC44A2Q8IWA5 706 aaPredicted RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 SLC44A1Q8WWI5 657 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 ATXN2LQ8WWM7 1075 aaKnown RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 WBP2Q969T9 261 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 QKIQ96PU8 341 aaKnown RBP eCLIP8.17□□□□□ -1.11e-6■■■□□ 16
CKAP2-203ENST00000378037 ACE2Q9BYF1 805 aaPredicted RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 ASB8Q9H765 288 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 ZFP14Q9HCL3 533 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 ARL8BQ9NVJ2 186 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 AGO1Q9UL18 857 aaKnown RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 SLC4A7Q9Y6M7 1214 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 MYOFQ9NZM1 2061 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 H7C4K7 107 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 HAS3O00219 553 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 OR1I1O60431 355 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 CCNT2O60583 730 aaKnown RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 PCDH8O95206 1070 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 SEC24AO95486 1093 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 VIPR2P41587 438 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 SEC13P55735 322 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 CCDC157Q569K6 752 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 ZNF781Q8N8C0 355 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 PPFIBP2Q8ND30 876 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 BCL7CQ8WUZ0 217 aaPredicted RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 LINC01599Q8WXQ3 324 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 LINC00597Q9H2U6 94 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 MID1IP1Q9NPA3 183 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 TXLNGQ9NUQ3 528 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 NCKIPSDQ9NZQ3 722 aa8.17□□□□□ -1.1
CKAP2-203ENST00000378037 CFAP20Q9Y6A4 193 aaKnown RBP8.17□□□□□ -1.1
CKAP2-203ENST00000378037 WASH3PC4AMC7 463 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 GLRA3O75311 464 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 NIPSNAP2O75323 286 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 SLC2A3P11169 496 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 TNFRSF8P28908 595 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 CSKP41240 450 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 SLC1A2P43004 574 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 SGSHP51688 502 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 STX1BP61266 288 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 CDK18Q07002 472 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 STARD3Q14849 445 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 ACAP1Q15027 740 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 C2orf27AQ580R0 203 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 LRRC8EQ6NSJ5 796 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 Q6ZVU0 165 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 NECAB2Q7Z6G3 386 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 RAB44Q7Z6P3 723 aaPredicted RBP8.16□□□□□ -1.1
CKAP2-203ENST00000378037 DEFB107AQ8IZN7 70 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 CDYL2Q8N8U2 506 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 C12orf50Q8NA57 414 aaPredicted RBP8.16□□□□□ -1.1
CKAP2-203ENST00000378037 RNF217Q8TC41 542 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 TCEAL4Q96EI5 215 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 MED8Q96G25 268 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 HHIPL1Q96JK4 782 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 SIGLEC10Q96LC7 697 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 TEKT5Q96M29 485 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 SLC39A3Q9BRY0 314 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 WDR6Q9NNW5 1121 aaKnown RBP8.16□□□□□ -1.1
CKAP2-203ENST00000378037 PSD3Q9NYI0 1048 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 SPG21Q9NZD8 308 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 SLC24A2Q9UI40 661 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 RBM47A0AV96 593 aaKnown RBP8.16□□□□□ -1.1
CKAP2-203ENST00000378037 C2orf81A6NN90 581 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 HIDE1A8MVS5 230 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 PEX1O43933 1283 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 GDF5P43026 501 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 GSSP48637 474 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 GNA12Q03113 381 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 RCN1Q15293 331 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 IMPG1Q17R60 797 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 ZBTB46Q86UZ6 589 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 BBS7Q8IWZ6 715 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 TLCD1Q96CP7 247 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 WDR83Q9BRX9 315 aaKnown RBP8.16□□□□□ -1.1
CKAP2-203ENST00000378037 MLPHQ9BV36 600 aaPredicted RBP8.16□□□□□ -1.1
CKAP2-203ENST00000378037 ASAH2Q9NR71 780 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 SLC45A1Q9Y2W3 748 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 DERAQ9Y315 318 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 PCDHA11Q9Y5I1 949 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 LCHNA4D1U4 455 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 NR5A2O00482 541 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 FGF18O76093 207 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 AHSGP02765 367 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 CLTBP09497 229 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 PPP3CCP48454 512 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 KRT33BQ14525 404 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 KCNJ11Q14654 390 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 AGKQ53H12 422 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 FSCBQ5H9T9 825 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 TMEM31Q5JXX7 168 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 CRTC3Q6UUV7 619 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 ZNF572Q7Z3I7 529 aaPredicted RBP8.16□□□□□ -1.1
CKAP2-203ENST00000378037 COLGALT2Q8IYK4 626 aa8.16□□□□□ -1.1
CKAP2-203ENST00000378037 MSL3Q8N5Y2 521 aaKnown RBP8.16□□□□□ -1.1
CKAP2-203ENST00000378037 SPDYE1Q8NFV5 336 aaPredicted RBP8.16□□□□□ -1.1
CKAP2-203ENST00000378037 GABPB2Q8TAK5 448 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms