RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 FOXD2O60548 495 aaPredicted RBP13.35□□□□□ -0.27
CKAP2-202ENST00000378034 GFRA3O60609 400 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 GJB3O75712 270 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 STK10O94804 968 aaKnown RBP13.35□□□□□ -0.27
CKAP2-202ENST00000378034 IGHV4-34P06331 123 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 GNSP15586 552 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 ITPKAP23677 461 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 CD27P26842 260 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 RBL1P28749 1068 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 MPLP40238 635 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 ABL2P42684 1182 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 RPS21P63220 83 aaKnown RBP13.35□□□□□ -0.27
CKAP2-202ENST00000378034 DSC2Q02487 901 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 PLA2G2CQ5R387 149 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 ARMC12Q5T9G4 340 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 B4GALNT4Q76KP1 1039 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 PRPF39Q86UA1 669 aaKnown RBP13.35□□□□□ -0.27
CKAP2-202ENST00000378034 RGL4Q8IZJ4 473 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 PAF1Q8N7H5 531 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 SLC35B2Q8TB61 432 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 IMP4Q96G21 291 aaKnown RBP13.35□□□□□ -0.27
CKAP2-202ENST00000378034 AGAP3Q96P47 875 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 VPS45Q9NRW7 570 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 PHTF1Q9UMS5 762 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 DMTF1Q9Y222 760 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 RAI2Q9Y5P3 530 aa13.35□□□□□ -0.27
CKAP2-202ENST00000378034 A0A1W2PPC4 97 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 TCRBV7S2A1N4TA0A589 114 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 CFAP69A5D8W1 941 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 PRR5-ARHGAP8B1AHC4 643 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 CES2O00748 559 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 NEMP1O14524 444 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 CEP104O60308 925 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 RNGTTO60942 597 aaKnown RBP13.34□□□□□ -0.27
CKAP2-202ENST00000378034 PCDH8O95206 1070 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 PGLSO95336 258 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 RPL26P61254 145 aaKnown RBP13.34□□□□□ -0.27
CKAP2-202ENST00000378034 NIPAL4Q0D2K0 466 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 TRAF2Q12933 501 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 TMEM52BQ4KMG9 183 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 HORMAD1Q86X24 394 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 NDUFAF2Q8N183 169 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 PIGKQ92643 395 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 KLHL8Q9P2G9 620 aaPredicted RBP13.34□□□□□ -0.27
CKAP2-202ENST00000378034 TTC7AQ9ULT0 858 aaPredicted RBP13.34□□□□□ -0.27
CKAP2-202ENST00000378034 RPL26L1Q9UNX3 145 aaKnown RBP13.34□□□□□ -0.27
CKAP2-202ENST00000378034 RIOK3O14730 519 aaKnown RBP13.34□□□□□ -0.27
CKAP2-202ENST00000378034 FZD6O60353 706 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 CPP00450 1065 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 GNG11P61952 73 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 DUOXA1Q1HG43 343 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 SETMARQ53H47 684 aaPredicted RBP13.34□□□□□ -0.27
CKAP2-202ENST00000378034 HS1BP3Q53T59 392 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 ITPRIPL1Q6GPH6 555 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 PID1Q7Z2X4 250 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 ZSWIM9Q86XI8 627 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 ZNF567Q8N184 647 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 RASGEF1CQ8N431 466 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 ASB12Q8WXK4 309 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 SNX19Q92543 992 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 TADA1Q96BN2 335 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 NAP1L3Q99457 506 aaPredicted RBP13.34□□□□□ -0.27
CKAP2-202ENST00000378034 TDRD1Q9BXT4 1180 aaKnown RBP13.34□□□□□ -0.27
CKAP2-202ENST00000378034 CEP41Q9BYV8 373 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 USP29Q9HBJ7 922 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 PCDH12Q9NPG4 1184 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 HOMER3Q9NSC5 361 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 EIF2B4Q9UI10 523 aaKnown RBP13.34□□□□□ -0.27
CKAP2-202ENST00000378034 R3HDM2Q9Y2K5 976 aaKnown RBP13.34□□□□□ -0.27
CKAP2-202ENST00000378034 PPIL1Q9Y3C6 166 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 PCDHB9Q9Y5E1 797 aa13.34□□□□□ -0.27
CKAP2-202ENST00000378034 A0A1B0GTW7 788 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 A0A1W2PQU0 124 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 KCNN4O15554 427 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 SPINT1O43278 529 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 FGGP02679 453 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 ATP1A1P05023 1023 aaKnown RBP13.33□□□□□ -0.28
CKAP2-202ENST00000378034 MMP2P08253 660 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 ZNF806P0C7X5 589 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 STIP1P31948 543 aaKnown RBP13.33□□□□□ -0.28
CKAP2-202ENST00000378034 CD86P42081 329 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 PPP2CBP62714 309 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 PPP2CAP67775 309 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 SKOR1P84550 965 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 CSRP2Q16527 193 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 TMEM259Q4ZIN3 620 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 C1orf216Q8TAB5 229 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 CXorf40AQ8TE69 158 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 PDCD6IPQ8WUM4 868 aaKnown RBP13.33□□□□□ -0.28
CKAP2-202ENST00000378034 PPP1R2P1Q96PQ5 205 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 FCRL5Q96RD9 977 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 FAM118BQ9BPY3 351 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 HINFPQ9BQA5 517 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 SNX12Q9UMY4 172 aa13.33□□□□□ -0.28
CKAP2-202ENST00000378034 C5orf60A6NFR6 353 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 BCAT2O15382 392 aaPredicted RBP13.32□□□□□ -0.28
CKAP2-202ENST00000378034 LIASO43766 372 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 PRLRP16471 622 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 CXCR5P32302 372 aa13.32□□□□□ -0.28
CKAP2-202ENST00000378034 CD68P34810 354 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms