RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 WARS2Q9UGM6 360 aaKnown RBP15.99■□□□□ 0.15
CKAP4-201ENST00000378026 VPS51Q9UID3 782 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 LY75O60449 1722 aa15.99■□□□□ 0.15
CKAP4-201ENST00000378026 TRIM64CA6NLI5 447 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 A8MU76 341 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 PPEF2O14830 753 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 DYNC1LI2O43237 492 aaPredicted RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 SNAP91O60641 907 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 NCK1P16333 377 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 PSMA4P25789 261 aaKnown RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 ZBTB17Q13105 803 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 MXD4Q14582 209 aaPredicted RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 SLC10A6Q3KNW5 377 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 VPS26BQ4G0F5 336 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 ZNF618Q5T7W0 954 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 DEFB106AQ8N104 65 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 MFSD2AQ8NA29 543 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 ADAMTS16Q8TE57 1224 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 HEXDCQ8WVB3 486 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 SGCDQ92629 289 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 MAELQ96JY0 434 aaKnown RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 GLT1D1Q96MS3 346 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 SLC25A23Q9BV35 468 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 CCM2LQ9NUG4 571 aaPredicted RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 DPP3Q9NY33 737 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 IFT80Q9P2H3 777 aaPredicted RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 ZNF214Q9UL59 606 aaPredicted RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 MRPL42Q9Y6G3 142 aaKnown RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 UBR3Q6ZT12 1888 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 CNOT3O75175 753 aaKnown RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 TOMM70O94826 608 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 FARP2O94887 1054 aaPredicted RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 CYP51A1Q16850 503 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 FAM117BQ6P1L5 589 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 ZC3H15Q8WU90 426 aaKnown RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 SEPT8Q92599 483 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 SEPHS2Q99611 448 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 HERC2P3Q9BVR0 1158 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 CXCL16Q9H2A7 254 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 ADNPQ9H2P0 1102 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 PKD2L2Q9NZM6 624 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 NME7Q9Y5B8 376 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 TARM1B6A8C7 271 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 NFKB1P19838 968 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 EEF1DP29692 281 aaKnown RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 PSMD8P48556 350 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 GLUD2P49448 558 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 HK2P52789 917 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 GALNT2Q10471 571 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 INPP5AQ14642 412 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 POU6F1Q14863 301 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 FAM160B1Q5W0V3 765 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 SLC2A7Q6PXP3 512 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 MFSD6LQ8IWD5 586 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 PDZD8Q8NEN9 1154 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 DOK1Q99704 481 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 C9orf16Q9BUW7 83 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 MLPHQ9BV36 600 aaPredicted RBP15.98■□□□□ 0.15
CKAP4-201ENST00000378026 DNAI2Q9GZS0 605 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 RHOJQ9H4E5 214 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 ACAD9Q9H845 621 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 ARMC1Q9NVT9 282 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 ANKRD6Q9Y2G4 727 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 TCAF1Q9Y4C2 921 aa15.98■□□□□ 0.15
CKAP4-201ENST00000378026 FAM95CA0A1B0GW59 222 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 STMN1P16949 149 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 PTPN9P43378 593 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 RAB15P59190 212 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 CUZD1Q86UP6 607 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 TRUB1Q8WWH5 349 aaKnown RBP15.97■□□□□ 0.15
CKAP4-201ENST00000378026 TBC1D13Q9NVG8 400 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.97■□□□□ 0.15
CKAP4-201ENST00000378026 GPRC5DQ9NZD1 345 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 FZD10Q9ULW2 581 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 PTGDR2Q9Y5Y4 395 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 FAM72CH0Y354 149 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 TTKP33981 857 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 IDUAP35475 653 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 OPRL1P41146 370 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 RAD23AP54725 363 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 PIGFQ07326 219 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 PPIL2Q13356 520 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 FAM83EQ2M2I3 478 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 FUT11Q495W5 492 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 FAM72AQ5TYM5 149 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 FAM72DQ6L9T8 149 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 FAM72BQ86X60 149 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 SNX19Q92543 992 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 KIF12Q96FN5 646 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 KLHL25Q9H0H3 589 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 MRPL46Q9H2W6 279 aaKnown RBP15.97■□□□□ 0.15
CKAP4-201ENST00000378026 NANOGQ9H9S0 305 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 AGPAT4Q9NRZ5 378 aa15.97■□□□□ 0.15
CKAP4-201ENST00000378026 EEF2KO00418 725 aaKnown RBP15.96■□□□□ 0.15
CKAP4-201ENST00000378026 LSM1O15116 133 aaKnown RBP15.96■□□□□ 0.15
CKAP4-201ENST00000378026 ATICP31939 592 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 RCVRNP35243 200 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 TAS2R39P59534 338 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 RAB10P61026 200 aa15.96■□□□□ 0.15
CKAP4-201ENST00000378026 INCA1Q0VD86 236 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms