RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 NUP107P57740 925 aa13.71□□□□□ -0.22
GPC6-201ENST00000377047 INTS6LQ5JSJ4 861 aaKnown RBP13.71□□□□□ -0.22
GPC6-201ENST00000377047 PHYKPLQ8IUZ5 450 aa13.71□□□□□ -0.22
GPC6-201ENST00000377047 BSNDQ8WZ55 320 aa13.71□□□□□ -0.22
GPC6-201ENST00000377047 AIF1P55008 147 aa13.71□□□□□ -0.22
GPC6-201ENST00000377047 BMT2Q1RMZ1 405 aa13.71□□□□□ -0.22
GPC6-201ENST00000377047 RBFAQ8N0V3 343 aa13.71□□□□□ -0.22
GPC6-201ENST00000377047 RNFT2Q96EX2 444 aa13.71□□□□□ -0.22
GPC6-201ENST00000377047 TMEM216Q9P0N5 145 aa13.71□□□□□ -0.22
GPC6-201ENST00000377047 ATRNO75882 1429 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 PDE5AO76074 875 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 ZCCHC18P0CG32 403 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 MAGEA10P43363 369 aaPredicted RBP13.7□□□□□ -0.22
GPC6-201ENST00000377047 ALG11Q2TAA5 492 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 PPP2R2DQ66LE6 453 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 SCIMPQ6UWF3 145 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 STK32CQ86UX6 486 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 OR52K2Q8NGK3 314 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 CDRT15Q96T59 188 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 OXCT2Q9BYC2 517 aaPredicted RBP13.7□□□□□ -0.22
GPC6-201ENST00000377047 FLT3P36888 993 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 MRPS35P82673 323 aaKnown RBP13.7□□□□□ -0.22
GPC6-201ENST00000377047 TRIM71Q2Q1W2 868 aaKnown RBP13.7□□□□□ -0.22
GPC6-201ENST00000377047 AP5B1Q2VPB7 878 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 FAAH2Q6GMR7 532 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 IZUMO2Q6UXV1 221 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 CCDC103Q8IW40 242 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 RPRD1BQ9NQG5 326 aaKnown RBP13.7□□□□□ -0.22
GPC6-201ENST00000377047 ADAM30Q9UKF2 790 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 STBD1O95210 358 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 ATP5F1P24539 256 aaPredicted RBP13.7□□□□□ -0.22
GPC6-201ENST00000377047 NAGLUP54802 743 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 WNT3AP56704 352 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 ERVK-21P61565 698 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 RPL38P63173 70 aaKnown RBP13.7□□□□□ -0.22
GPC6-201ENST00000377047 TRMT5Q32P41 509 aaKnown RBP13.7□□□□□ -0.22
GPC6-201ENST00000377047 ZCWPW2Q504Y3 356 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 RFWD3Q6PCD5 774 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 OR14C36Q8NHC7 312 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 ATXN2LQ8WWM7 1075 aaKnown RBP13.7□□□□□ -0.22
GPC6-201ENST00000377047 BTBD10Q9BSF8 475 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 ACAT2Q9BWD1 397 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 DCLRE1BQ9H816 532 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 GEMIN8Q9NWZ8 242 aaKnown RBP13.7□□□□□ -0.22
GPC6-201ENST00000377047 ENOPH1Q9UHY7 261 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 SLC28A1O00337 649 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 ULK1O75385 1050 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 GRIA4P48058 902 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 BATF3Q9NR55 127 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 SOWAHBA6NEL2 793 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 UGT2B4P06133 528 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 TALDO1P37837 337 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 KPNB1Q14974 876 aaKnown RBP13.7□□□□□ -0.22
GPC6-201ENST00000377047 POLNQ7Z5Q5 900 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 CDYL2Q8N8U2 506 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 TMEM237Q96Q45 408 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 EPS8L2Q9H6S3 715 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 POLR1BQ9H9Y6 1135 aa13.7□□□□□ -0.22
GPC6-201ENST00000377047 C15orf38-AP3S2A0A0A6YYH1 394 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 ERAL1O75616 437 aaKnown RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 MYL12AP19105 171 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 NEK10Q6ZWH5 1172 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 ARPINQ7Z6K5 226 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 ADAMTSL2Q86TH1 951 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 FBXO30Q8TB52 745 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 APOL4Q9BPW4 351 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 PALMDQ9NP74 551 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 EVLQ9UI08 416 aaPredicted RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 LYVE1Q9Y5Y7 322 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 ADGRB2O60241 1585 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 GPRIN3Q6ZVF9 776 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 NIFKQ9BYG3 293 aaKnown RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 AGO3Q9H9G7 860 aaKnown RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 PCDH18Q9HCL0 1135 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 CD248Q9HCU0 757 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 PHPT1Q9NRX4 125 aaPredicted RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 ANXA6P08133 673 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 H2AFXP16104 143 aaPredicted RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 STX4Q12846 297 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 PCDH20Q8N6Y1 951 aaKnown RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 BCL9LQ86UU0 1499 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 A0A1B0GW55 424 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 E9PAM4 449 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 DUX4L2P0CJ85 424 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 DUX4L3P0CJ86 424 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 DUX4L4P0CJ87 422 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 DUX4L5P0CJ88 424 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 DUX4L6P0CJ89 424 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 DUX4L7P0CJ90 424 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 ME2P23368 584 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 CRHR2Q13324 411 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 SAMD4BQ5PRF9 694 aaKnown RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 BBS12Q6ZW61 710 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 APTXQ7Z2E3 356 aaKnown RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 RIPOR3Q96MK2 946 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 MCCC1Q96RQ3 725 aaPredicted RBP13.69□□□□□ -0.22
GPC6-201ENST00000377047 LHX5Q9H2C1 402 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 DUX4Q9UBX2 424 aa13.69□□□□□ -0.22
GPC6-201ENST00000377047 MRC1P22897 1456 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms