RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 KCNE4Q8WWG9 221 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 HMCESQ96FZ2 354 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 PCDHB18PQ96TA0 734 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 BOCQ9BWV1 1114 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 ATP13A3Q9H7F0 1226 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 PARVAQ9NVD7 372 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 ITM2BQ9Y287 266 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 PCDHB1Q9Y5F3 818 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 PCDHGA8Q9Y5G5 932 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 ACTL7AQ9Y615 435 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 CHD5Q8TDI0 1954 aa14.91□□□□□ -0.02
HDAC6-204ENST00000376643 LAMA5O15230 3695 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 LY6G6EA0A0G2JKS1 128 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 A0A1W2PQ67 120 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 TSPAN11A1L157 253 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 DAPK3O43293 454 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 MMP20O60882 483 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 RNF8O76064 485 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 RASGRP1O95267 797 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 MBD3O95983 291 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 MPOP05164 745 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 TNFAIP3P21580 790 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 KELP23276 732 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 SERPINA4P29622 427 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 IGFALSP35858 605 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 EIF4A3P38919 411 aaKnown RBP14.9□□□□□ -0.02
HDAC6-204ENST00000376643 CSNK1DP48730 415 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 POLR2LP62875 67 aaKnown RBP14.9□□□□□ -0.02
HDAC6-204ENST00000376643 RHDQ02161 417 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 EIF3IQ13347 325 aaKnown RBP14.9□□□□□ -0.02
HDAC6-204ENST00000376643 AGERQ15109 404 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 UGP2Q16851 508 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 KLHL40Q2TBA0 621 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 TMCO4Q5TGY1 634 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 LEKR1Q6ZMV7 388 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 GKN2Q86XP6 184 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 PSTKQ8IV42 348 aaKnown RBP14.9□□□□□ -0.02
HDAC6-204ENST00000376643 MCOLN2Q8IZK6 566 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 ARL14Q8N4G2 192 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 ARL10Q8N8L6 244 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 SLC39A7Q92504 469 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 HIC2Q96JB3 615 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 SUV39H2Q9H5I1 410 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 GGT7Q9UJ14 662 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 U3KQA8 63 aa14.9□□□□□ -0.02
HDAC6-204ENST00000376643 DOCK9Q9BZ29 2069 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 TCRBV5S1A1TA0A578 114 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 ERVH48-1M5A8F1 160 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 SPINT1O43278 529 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 GJB6O95452 261 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 TIMP2P16035 220 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 PSMA2P25787 234 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 RENBPP51606 427 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 HK3P52790 923 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 ADKP55263 362 aaKnown RBP14.89□□□□□ -0.03
HDAC6-204ENST00000376643 MTM1Q13496 603 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 SPIDRQ14159 915 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 NFATC4Q14934 902 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 FILIP1LQ4L180 1135 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 RAB6CQ53S08 254 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 PPP1R15BQ5SWA1 713 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 GUSBP11Q6P575 273 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 PYROXD2Q8N2H3 581 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 TP53I13Q8NBR0 393 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-204ENST00000376643 WDR36Q8NI36 951 aaKnown RBP14.89□□□□□ -0.03
HDAC6-204ENST00000376643 TRIM11Q96F44 468 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 WRAP53Q9BUR4 548 aaKnown RBP14.89□□□□□ -0.03
HDAC6-204ENST00000376643 LRRC61Q9BV99 259 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 CINPQ9BW66 212 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-204ENST00000376643 RAB6CQ9H0N0 254 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 NOL6Q9H6R4 1146 aaKnown RBP14.89□□□□□ -0.03
HDAC6-204ENST00000376643 KCTD5Q9NXV2 234 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 PADI4Q9UM07 663 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 ATP8A1Q9Y2Q0 1164 aa14.89□□□□□ -0.03
HDAC6-204ENST00000376643 MYLKQ15746 1914 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 EEF2KO00418 725 aaKnown RBP14.88□□□□□ -0.03
HDAC6-204ENST00000376643 MUSKO15146 869 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 PRPSAP2O60256 369 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 PRAMEF11O60813 436 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 PALMO75781 387 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 ATP1A3P13637 1013 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 RPL7AP62424 266 aaKnown RBP14.88□□□□□ -0.03
HDAC6-204ENST00000376643 CXADRP78310 365 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 IRF4Q15306 451 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 LZTR1Q8N653 840 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 FNIP1Q8TF40 1166 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 WBP1Q96G27 269 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 EDEM3Q9BZQ6 932 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 STRADBQ9C0K7 418 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 LRRC19Q9H756 370 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 SP110Q9HB58 689 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 PCDH12Q9NPG4 1184 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 LHX3Q9UBR4 397 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 KLQ9UEF7 1012 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 KLF15Q9UIH9 416 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 AP4E1Q9UPM8 1137 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 SCINQ9Y6U3 715 aa14.88□□□□□ -0.03
HDAC6-204ENST00000376643 IGSF10Q6WRI0 2623 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 ASXL3Q9C0F0 2248 aa14.87□□□□□ -0.03
HDAC6-204ENST00000376643 CCDC187A0A096LP49 1063 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms