RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.1□□□□□ -0.15
MSH5-202ENST00000375740 NT5C1B-RDH14C9J2C7 533 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 TMCC1O94876 653 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 ATP5BP06576 529 aaKnown RBP14.1□□□□□ -0.15
MSH5-202ENST00000375740 UQCRBP14927 111 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 FUT4P22083 530 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 PCSK6P29122 969 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 AVPR1AP37288 418 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 SLC11A1P49279 550 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 IDH3AP50213 366 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 RENBPP51606 427 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 MAXP61244 160 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 ARHGAP8P85298 464 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 PLOD1Q02809 727 aaPredicted RBP14.1□□□□□ -0.15
MSH5-202ENST00000375740 SLC10A7Q0GE19 358 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 GRM2Q14416 872 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 TRIP4Q15650 581 aaPredicted RBP14.1□□□□□ -0.15
MSH5-202ENST00000375740 MGAT5BQ3V5L5 792 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 C10orf120Q5SQS8 335 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 RAP1GAP2Q684P5 730 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 FBXL22Q6P050 247 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 KDELC1Q6UW63 502 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 RNF19BQ6ZMZ0 732 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 SLC41A1Q8IVJ1 513 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 ARHGAP24Q8N264 748 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 HIPK4Q8NE63 616 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 CAPNS2Q96L46 248 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 SEPT5Q99719 369 aaPredicted RBP14.1□□□□□ -0.15
MSH5-202ENST00000375740 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.1□□□□□ -0.157e-6■■■■□ 23.5
MSH5-202ENST00000375740 SLC25A51Q9H1U9 297 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 ELAC1Q9H777 363 aaKnown RBP14.1□□□□□ -0.15
MSH5-202ENST00000375740 HMX1Q9NP08 348 aaPredicted RBP14.1□□□□□ -0.15
MSH5-202ENST00000375740 TMEM248Q9NWD8 314 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 MARCH5Q9NX47 278 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 MARCH2Q9P0N8 246 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 BRCA2P51587 3418 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 SLC12A8A0AV02 714 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 CIB2O75838 187 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 TFAP2AP05549 437 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 SMIM18P0DKX4 95 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 SLC25A3Q00325 362 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 ASPHQ12797 758 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 SEPT6Q14141 434 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 MARC1Q5VT66 337 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 CNTN4Q8IWV2 1026 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 METTL25Q8N6Q8 603 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 EFCAB3Q8N7B9 438 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 BTN2A3PQ96KV6 586 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 C1QTNF1Q9BXJ1 281 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 OXCT2Q9BYC2 517 aaPredicted RBP14.1□□□□□ -0.15
MSH5-202ENST00000375740 TASP1Q9H6P5 420 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 S100A14Q9HCY8 104 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 TLR8Q9NR97 1041 aaKnown RBP14.1□□□□□ -0.15
MSH5-202ENST00000375740 TAGLN3Q9UI15 199 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 RUVBL2Q9Y230 463 aaKnown RBP14.1□□□□□ -0.15
MSH5-202ENST00000375740 APOBEC2Q9Y235 224 aaKnown RBP14.1□□□□□ -0.15
MSH5-202ENST00000375740 ANKRD6Q9Y2G4 727 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 GMEB1Q9Y692 573 aa14.1□□□□□ -0.15
MSH5-202ENST00000375740 A0A088AWK7 358 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 MTMR11A4FU01 709 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 CCDC160A6NGH7 325 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 ZNF195O14628 629 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 TRIM13O60858 407 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 VNN2O95498 520 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 CDK4P11802 303 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 PBX3P40426 434 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 PDK3Q15120 406 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 VWA5B1Q5TIE3 1220 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 UGT2A3Q6UWM9 527 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 DHDDSQ86SQ9 333 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 ZNF354CQ86Y25 554 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 MFSD6LQ8IWD5 586 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 TMEM151AQ8N4L1 468 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 PTCD2Q8WV60 388 aaKnown RBP14.09□□□□□ -0.15
MSH5-202ENST00000375740 PSMG2Q969U7 264 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 DGCR14Q96DF8 476 aaKnown RBP14.09□□□□□ -0.15
MSH5-202ENST00000375740 PABPC5Q96DU9 382 aaKnown RBP14.09□□□□□ -0.15
MSH5-202ENST00000375740 IMP4Q96G21 291 aaKnown RBP14.09□□□□□ -0.15
MSH5-202ENST00000375740 MRM3Q9HC36 420 aaKnown RBP14.09□□□□□ -0.15
MSH5-202ENST00000375740 TREX1Q9NSU2 369 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 PCDHB12Q9Y5F1 795 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 IGLV3-10A0A075B6K4 115 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 TTC24A2A3L6 582 aaPredicted RBP14.09□□□□□ -0.15
MSH5-202ENST00000375740 CD86P42081 329 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 TBL3Q12788 808 aaKnown RBP14.09□□□□□ -0.15
MSH5-202ENST00000375740 GPR17Q13304 367 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 IHHQ14623 411 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 UGP2Q16851 508 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 MMEL1Q495T6 779 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 RALGPS1Q5JS13 557 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 RTP2Q5QGT7 225 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 TMCO4Q5TGY1 634 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 KLHDC10Q6PID8 442 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 TAS1R1Q7RTX1 841 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 MOCOSQ96EN8 888 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 STN1Q9H668 368 aaKnown RBP14.09□□□□□ -0.15
MSH5-202ENST00000375740 SP110Q9HB58 689 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 DNAJC28Q9NX36 388 aa14.09□□□□□ -0.15
MSH5-202ENST00000375740 HSPA4LO95757 839 aa14.08□□□□□ -0.15
MSH5-202ENST00000375740 SLC35E2BP0CK96 405 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms