RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SCML4Q8N228 414 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 TMEM102Q8N9M5 508 aaPredicted RBP14.66□□□□□ -0.06
MSH5-201ENST00000375703 ASB9Q96DX5 294 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 PRICKLE1Q96MT3 831 aaPredicted RBP14.66□□□□□ -0.06
MSH5-201ENST00000375703 OLFM1Q99784 485 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 KATNAL1Q9BW62 490 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 MRPL40Q9NQ50 206 aaKnown RBP14.66□□□□□ -0.06
MSH5-201ENST00000375703 FLRT1Q9NZU1 646 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.66□□□□□ -0.06
MSH5-201ENST00000375703 APPL1Q9UKG1 709 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 SH3BP1Q9Y3L3 701 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 E7ENX8 843 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 TNFAIP8O95379 198 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 CAPNS1P04632 268 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 CCDC166P0CW27 439 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 PFKPQ01813 784 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 GK3PQ14409 553 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 MAPRE2Q15555 327 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.66□□□□□ -0.06
MSH5-201ENST00000375703 AGKQ53H12 422 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 NOMO2Q5JPE7 1267 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 KIAA0408Q6ZU52 694 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 AHI1Q8N157 1196 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 ATP6V1E2Q96A05 226 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 PHF21BQ96EK2 531 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 ZCWPW1Q9H0M4 648 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 PCDHAC1Q9H158 963 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 ABCC13Q9NSE7 274 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 MRGBPQ9NV56 204 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 CCDC167Q9P0B6 97 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 SCN4AP35499 1836 aa14.66□□□□□ -0.06
MSH5-201ENST00000375703 A8MT66 165 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 PSMD12O00232 456 aaPredicted RBP14.65□□□□□ -0.06
MSH5-201ENST00000375703 MSI1O43347 362 aaKnown RBP14.65□□□□□ -0.06
MSH5-201ENST00000375703 B3GAT3O94766 335 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 LTA4HP09960 611 aaKnown RBP14.65□□□□□ -0.06
MSH5-201ENST00000375703 HOXC13P31276 330 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 PLK1P53350 603 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 WNT3AP56704 352 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 C1QTNF8P60827 252 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 FASTKQ14296 549 aaKnown RBP14.65□□□□□ -0.06
MSH5-201ENST00000375703 PAOXQ6QHF9 649 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 AGMOQ6ZNB7 445 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 CUZD1Q86UP6 607 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 CALML6Q8TD86 181 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 PARK7Q99497 189 aaKnown RBP14.65□□□□□ -0.06
MSH5-201ENST00000375703 UNC93B1Q9H1C4 597 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 MEAF6Q9HAF1 191 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 TNFRSF12AQ9NP84 129 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 TBC1D13Q9NVG8 400 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 MPP6Q9NZW5 540 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 AP4S1Q9Y587 144 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 ZNF236Q9UL36 1845 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 RBP1P09455 135 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 FAM58BPP0C7Q3 252 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 HTR7P34969 479 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 BRCC3P46736 316 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 SH3BGRP55822 239 aaPredicted RBP14.65□□□□□ -0.06
MSH5-201ENST00000375703 MRPS6P82932 125 aaKnown RBP14.65□□□□□ -0.06
MSH5-201ENST00000375703 CDKL1Q00532 357 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 MYBPC1Q00872 1141 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 LRP8Q14114 963 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 SQLEQ14534 574 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 PSMD5Q16401 504 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 MANEALQ5VSG8 457 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 TAF2Q6P1X5 1199 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 RBM44Q6ZP01 1051 aaKnown RBP14.65□□□□□ -0.06
MSH5-201ENST00000375703 BEND5Q7L4P6 421 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 LRRTM3Q86VH5 581 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 TMEM209Q96SK2 561 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 MRPS26Q9BYN8 205 aaKnown RBP14.65□□□□□ -0.06
MSH5-201ENST00000375703 IPO11Q9UI26 975 aaKnown RBP14.65□□□□□ -0.06
MSH5-201ENST00000375703 GIT1Q9Y2X7 761 aa14.65□□□□□ -0.06
MSH5-201ENST00000375703 A0A1B0GVG6 124 aa14.65□□□□□ -0.07
MSH5-201ENST00000375703 HEATR9A2RTY3 570 aa14.65□□□□□ -0.07
MSH5-201ENST00000375703 MOCS2O96007 188 aaPredicted RBP14.65□□□□□ -0.07
MSH5-201ENST00000375703 ARSAP15289 507 aa14.65□□□□□ -0.07
MSH5-201ENST00000375703 ATP6V1B1P15313 513 aa14.65□□□□□ -0.07
MSH5-201ENST00000375703 LEPRP48357 1165 aaKnown RBP14.65□□□□□ -0.07
MSH5-201ENST00000375703 PSMD8P48556 350 aa14.65□□□□□ -0.07
MSH5-201ENST00000375703 PPP1R3AQ16821 1122 aa14.65□□□□□ -0.07
MSH5-201ENST00000375703 GABPB2Q8TAK5 448 aaPredicted RBP14.65□□□□□ -0.07
MSH5-201ENST00000375703 HMGCLL1Q8TB92 370 aa14.65□□□□□ -0.07
MSH5-201ENST00000375703 CASP10Q92851 521 aa14.65□□□□□ -0.07
MSH5-201ENST00000375703 EME1Q96AY2 570 aa14.65□□□□□ -0.07
MSH5-201ENST00000375703 PRPF18Q99633 342 aaKnown RBP14.65□□□□□ -0.07
MSH5-201ENST00000375703 CACNA2D2Q9NY47 1150 aa14.65□□□□□ -0.07
MSH5-201ENST00000375703 SUCOQ9UBS9 1254 aaKnown RBP14.65□□□□□ -0.07
MSH5-201ENST00000375703 NUDT5Q9UKK9 219 aa14.65□□□□□ -0.07
MSH5-201ENST00000375703 FBP2O00757 339 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 HDCP19113 662 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 RGS2P41220 211 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 CLCN5P51795 746 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 ITKQ08881 620 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 MAP2K5Q13163 448 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 MAP7Q14244 749 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 ACAP2Q15057 778 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 MGAT5BQ3V5L5 792 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 REP15Q6BDI9 236 aa14.64□□□□□ -0.07
MSH5-201ENST00000375703 C14orf80Q86SX3 495 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms