RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PRKAA2P54646 552 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 TAS2R39P59534 338 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 SULT2A1Q06520 285 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 FASTKQ14296 549 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 POTEHQ6S545 545 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 BNIPLQ7Z465 357 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 KDELC2Q7Z4H8 507 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 OSTM1Q86WC4 334 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 ALDH16A1Q8IZ83 802 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 DIS3LQ8TF46 1054 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 IRGQQ8WZA9 623 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 RMND5BQ96G75 393 aaPredicted RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 LRRC4Q9HBW1 653 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 CHST12Q9NRB3 414 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 UTP6Q9NYH9 597 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 CNOT6Q9ULM6 557 aaKnown RBP14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 STAP1Q9ULZ2 295 aa14.24□□□□□ -0.13
CLCNKA-202ENST00000375692 HEATR9A2RTY3 570 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 TRPC5OSA6NMA1 111 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 PSMD12O00232 456 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 AURKAO14965 403 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 RECQL4O94761 1208 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 GNAO1P09471 354 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 STMN1P16949 149 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 HADHAP40939 763 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 MAP3K7CLP57077 242 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 CDH17Q12864 832 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 ZBTB49Q6ZSB9 765 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 PAQR9Q6ZVX9 377 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 CHSY3Q70JA7 882 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 FAM47BQ8NA70 645 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 ELMO2Q96JJ3 720 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 KIFC1Q9BW19 673 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 DUSP16Q9BY84 665 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 DNAI2Q9GZS0 605 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 FAM49AQ9H0Q0 323 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 DUS2Q9NX74 493 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 NCKIPSDQ9NZQ3 722 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 TDRKHQ9Y2W6 561 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 ATP6AP2A0A1C7CYW4 349 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 YJEFN3A6XGL0 299 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 ATP6AP2O75787 350 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 SMIM10L2AP0DMW4 78 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 SMIM10L2BP0DMW5 78 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 TSPAN8P19075 237 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 TKTL1P51854 596 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 STX5Q13190 355 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 FSCN1Q16658 493 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 GNASQ5JWF2 1037 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 C6orf10Q5SRN2 563 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 ITPRIPL1Q6GPH6 555 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 PDZD4Q76G19 769 aaPredicted RBP14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 CPNE9Q8IYJ1 553 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 SIX6OS1Q8N1H7 587 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 FIBCD1Q8N539 461 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 B3GALNT2Q8NCR0 500 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 APPL2Q8NEU8 664 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 TEKT5Q96M29 485 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 AP5M1Q9H0R1 490 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 MRPL46Q9H2W6 279 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 PLEKHA5Q9HAU0 1116 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 WDR6Q9NNW5 1121 aaKnown RBP14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 EBF1Q9UH73 591 aa14.23□□□□□ -0.13
CLCNKA-202ENST00000375692 SAC3D1A6NKF1 404 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 ERI2A8K979 691 aaKnown RBP14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 TMX2-CTNND1H3BSU7 103 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 PIRO00625 290 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 UBDO15205 165 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 F2P00734 622 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 AKR1A1P14550 325 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 UGT1A6P19224 532 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 YWHAQP27348 245 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 SLC7A1P30825 629 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 CTBSQ01459 385 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 PRKCQQ04759 706 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 SEMA3BQ13214 749 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 CSHL1Q14406 222 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 IL31Q6EBC2 164 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 ARHGAP36Q6ZRI8 547 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 CANT1Q8WVQ1 401 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 RNF39Q9H2S5 420 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 FBRSL1Q9HCM7 1045 aaKnown RBP14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 RRN3Q9NYV6 651 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 MKI67P46013 3256 aaKnown RBP14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 TCRBV3S1A0A5B6 114 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 ARNTP27540 789 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 ENTPD1P49961 510 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 SOX4Q06945 474 aaPredicted RBP14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 NHSL2Q5HYW2 709 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 MFSD14CQ5VZR4 134 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 PKN3Q6P5Z2 889 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 CXCL17Q6UXB2 119 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 CATSPER4Q7RTX7 472 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 IPMKQ8NFU5 416 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 LRCH3Q96II8 777 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 SLC2A13Q96QE2 648 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 RANBP9Q96S59 729 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 DCUN1D5Q9BTE7 237 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 ULBP1Q9BZM6 244 aa14.22□□□□□ -0.13
CLCNKA-202ENST00000375692 IL1RL2Q9HB29 575 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms