RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 KREMEN2Q8NCW0 462 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 ST13P5Q8NFI4 369 aaPredicted RBP18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 GPR88Q9GZN0 384 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 GDAP2Q9NXN4 497 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 DNAJC25-GNG10A0A024R161 153 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 A0A087X1B8 175 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 FANCGO15287 622 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 KLC1Q07866 573 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 FAM45BPQ6NSW5 357 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 AFTPHQ6ULP2 937 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 DNAJB7Q7Z6W7 309 aaPredicted RBP18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 FAM45AQ8TCE6 357 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 DACT3Q96B18 629 aaPredicted RBP18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 POLG2Q9UHN1 485 aa18.08■□□□□ 0.49
PTPDC1-202ENST00000375360 A0A1W2PRU2 124 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 MATN3O15232 486 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 MGEA5O60502 916 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 GCATO75600 419 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 F7P08709 466 aaPredicted RBP18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 HOXB8P17481 243 aaPredicted RBP18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 DGKAP23743 735 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 MAPK8P45983 427 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 SLC11A1P49279 550 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 NIPA2Q8N8Q9 360 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 GBA3Q9H227 469 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 FBXO10Q9UK96 956 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 APPL1Q9UKG1 709 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 FCF1Q9Y324 198 aaKnown RBP18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 IGKV6-21A0A0C4DH24 114 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 A0A1B0GVM2 712 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 TCAF2A6NFQ2 919 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 MAP3K13O43283 966 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 TBC1D4O60343 1298 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 DDX5P17844 614 aaKnown RBP18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 NMBRP28336 390 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 EEF1DP29692 281 aaKnown RBP18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 KCNQ1P51787 676 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 PITX1P78337 314 aaPredicted RBP18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 TMC5Q6UXY8 1006 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 GET4Q7L5D6 327 aaPredicted RBP18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 NKAPQ8N5F7 415 aaKnown RBP18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 CATSPER1Q8NEC5 780 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 ACMSDQ8TDX5 336 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 NAF1Q96HR8 494 aaKnown RBP18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 SEPHS2Q99611 448 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 BTBD10Q9BSF8 475 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 PNPOQ9NVS9 261 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 VTI1BQ9UEU0 232 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 BTRCQ9Y297 605 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 STARD13Q9Y3M8 1113 aa18.08■□□□□ 0.48
PTPDC1-202ENST00000375360 C2orf71A6NGG8 1288 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 MRASO14807 208 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 HOXA11P31270 313 aaPredicted RBP18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 GPR1P46091 355 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 IRF8Q02556 426 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 GAD2Q05329 585 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 TRIP4Q15650 581 aaPredicted RBP18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 CYP1B1Q16678 543 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 INSCQ1MX18 579 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 TRIM60Q495X7 471 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 TXNDC8Q6A555 127 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 TEKT5Q96M29 485 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 TRIM45Q9H8W5 580 aaPredicted RBP18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 MLNP12872 115 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 INCA1Q0VD86 236 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 SERINC5Q86VE9 423 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 C11orf74Q86VG3 221 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 EFCAB3Q8N7B9 438 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 TMEM209Q96SK2 561 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 COPS8Q99627 209 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 DCLRE1BQ9H816 532 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 KCNK4Q9NYG8 393 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 NDUFAF1Q9Y375 327 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 CATP04040 527 aaKnown RBP18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 GRK3P35626 688 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 SLC25A3Q00325 362 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 CYP4X1Q8N118 509 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 DCBLD1Q8N8Z6 715 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 ARNTL2Q8WYA1 636 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 INPP5DQ92835 1189 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 MAGED4Q96JG8 741 aa18.07■□□□□ 0.48
PTPDC1-202ENST00000375360 F8W810 466 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 PIRO00625 290 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 NDST3O95803 873 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 ZNF23P17027 643 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 VHLP40337 213 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 ABRQ12979 859 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 GRM3Q14832 879 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 KIAA1324Q6UXG2 1013 aaKnown RBP18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 DENND6AQ8IWF6 608 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 UNC5BQ8IZJ1 945 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 ZNF557Q8N988 423 aaPredicted RBP18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 AGAP2Q99490 1192 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 ADAMTS10Q9H324 1103 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 MIOSQ9NXC5 875 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 ATP6V1B1P15313 513 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 HNRNPDQ14103 355 aaKnown RBP18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 C17orf99Q6UX52 265 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 MS4A4AQ96JQ5 239 aa18.06■□□□□ 0.48
PTPDC1-202ENST00000375360 TSC22D3Q99576 134 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms