RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 TIMM50Q3ZCQ8 353 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 RAP1GAP2Q684P5 730 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 ZNF605Q86T29 641 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 SYT12Q8IV01 421 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 AMER2Q8N7J2 671 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 PPP3R2Q96LZ3 170 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 QKIQ96PU8 341 aaKnown RBP eCLIP11.61□□□□□ -0.552e-7■■■■■ 29
PTCH1-203ENST00000375274 PRRG3Q9BZD7 231 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 GALNT8Q9NY28 637 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 WRAP73Q9P2S5 460 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-203ENST00000375274 SLC7A8Q9UHI5 535 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 LNPEPQ9UIQ6 1025 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 SIGLEC1Q9BZZ2 1709 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 IFT172Q9UG01 1749 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 A0A0J9YYE9 177 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 IRF6O14896 467 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 CBFA2T3O75081 653 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 DDNO94850 711 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-203ENST00000375274 LINC00032P0C843 101 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 DGKAP23743 735 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 PSEN1P49768 467 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 AIF1P55008 147 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 ACTR3P61158 418 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 NAA20P61599 178 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 FSCN1Q16658 493 aaKnown RBP11.61□□□□□ -0.55
PTCH1-203ENST00000375274 ARMC12Q5T9G4 340 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 GPRIN3Q6ZVF9 776 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 CNTD1Q8N815 330 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 ZYG11BQ9C0D3 744 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 GLOD4Q9HC38 313 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 ZFP14Q9HCL3 533 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 PTCH2Q9Y6C5 1203 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 UBR1Q8IWV7 1749 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 PEAK1Q9H792 1746 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 PIK3C2AO00443 1686 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 C2CD4BA6NLJ0 364 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 HOXA2O43364 376 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 LGR5O75473 907 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 GCATO75600 419 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 IPO13O94829 963 aaKnown RBP11.61□□□□□ -0.55
PTCH1-203ENST00000375274 SEC24AO95486 1093 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 NTRK1P04629 796 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 SLC18A1P54219 525 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 ENPEPQ07075 957 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 PCBP1Q15365 356 aaKnown RBP eCLIP11.61□□□□□ -0.55
PTCH1-203ENST00000375274 C6orf52Q5T4I8 152 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 CASP12Q6UXS9 341 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 SH3BP5LQ7L8J4 393 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 TBC1D21Q8IYX1 336 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 ZNF781Q8N8C0 355 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 NXNL1Q96CM4 212 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 CDCA5Q96FF9 252 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 MED8Q96G25 268 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 UXTQ9UBK9 157 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-203ENST00000375274 TRPC4Q9UBN4 977 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 TMCO1Q9UM00 188 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 PCDHB12Q9Y5F1 795 aa11.61□□□□□ -0.55
PTCH1-203ENST00000375274 FFAR3O14843 346 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 GPR42O15529 346 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 CST1P01037 141 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 PPP2R1BP30154 601 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 TALDO1P37837 337 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 RXRGP48443 463 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 TTPAP49638 278 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 GPR15P49685 360 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 RAB14P61106 215 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 ATP6V0D1P61421 351 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 GRM3Q14832 879 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 PDZK1Q5T2W1 519 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 NAT14Q8WUY8 206 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 BTN2A2Q8WVV5 523 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 KRT87PA6NCN2 255 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 AP2A1O95782 977 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 ANXA5P08758 320 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 OR56A5P0C7T3 313 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 ADSLP30566 484 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-203ENST00000375274 GALK1P51570 392 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 BCL2L1Q07817 233 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 PPIL2Q13356 520 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 PEX6Q13608 980 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 FAM35AQ86V20 835 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 PCDH19Q8TAB3 1148 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 PPP1R13LQ8WUF5 828 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 UCMAQ8WVF2 138 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 FCRL2Q96LA5 508 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-203ENST00000375274 SMAD5Q99717 465 aaKnown RBP11.6□□□□□ -0.55
PTCH1-203ENST00000375274 EBF4Q9BQW3 602 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 ARHGEF4Q9NR80 690 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 SLC25A13Q9UJS0 675 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 GMPPBQ9Y5P6 360 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 TRPV2Q9Y5S1 764 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 A0A1B0GW55 424 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 SH3BGRLO75368 114 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 SERPINI2O75830 405 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 DUX4L2P0CJ85 424 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 DUX4L3P0CJ86 424 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 DUX4L4P0CJ87 422 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 DUX4L5P0CJ88 424 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 DUX4L6P0CJ89 424 aa11.6□□□□□ -0.55
PTCH1-203ENST00000375274 DUX4L7P0CJ90 424 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms