RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 STRBPQ96SI9 672 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 QRSL1Q9H0R6 528 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 UCKL1Q9NWZ5 548 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 RPH3AQ9Y2J0 694 aaPredicted RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 FAM237AA0A1B0GTK4 181 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 RFXAPO00287 272 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 WNT7AO00755 349 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 DLGAP1O14490 977 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 NARSO43776 548 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 FAM189A1O60320 539 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 PROSCO94903 275 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ATE1O95260 518 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 EIF4A1P60842 406 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 ZNF613Q6PF04 617 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ANKS1BQ7Z6G8 1248 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 MARCH10Q8NA82 808 aaPredicted RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 MGME1Q9BQP7 344 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 MED24O75448 989 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CLVS2Q5SYC1 327 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ZNF790Q6PG37 636 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 FAM198BQ6UWH4 519 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ECHDC2Q86YB7 292 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 URGCPQ8TCY9 931 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 TRNT1Q96Q11 434 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 NUSAP1Q9BXS6 441 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 MRPL4Q9BYD3 311 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 TPK1Q9H3S4 243 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 IKZF3Q9UKT9 509 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 SLC2A3P11169 496 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CD83Q01151 205 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 SLC22A10Q63ZE4 541 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 UPF1Q92900 1129 aaKnown RBP eCLIP6.66□□□□□ -1.34
UBR4-204ENST00000375254 ZNF350Q9GZX5 532 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 TAS2R9Q9NYW1 312 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CCDC167Q9P0B6 97 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 PRAMEF1O95521 474 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CCNIQ14094 377 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 PLEKHN1Q494U1 663 aaPredicted RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 ADGRD2Q7Z7M1 963 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 THAP6Q8TBB0 222 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CORO2AQ92828 525 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 KLF6Q99612 283 aaPredicted RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 DPY30Q9C005 99 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 M0R036 132 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 VAPBO95292 243 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 AOC1P19801 751 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CYP2C18P33260 490 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 LPCAT4Q643R3 524 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 CHSY1Q86X52 802 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 GJD3Q8N144 294 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 POU5F2Q8N7G0 328 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 GSTCDQ8NEC7 633 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ZFP28Q8NHY6 868 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 REPS1Q96D71 796 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 ZNF597Q96LX8 424 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 KCTD7Q96MP8 289 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 TRIT1Q9H3H1 467 aaKnown RBP6.66□□□□□ -1.34
UBR4-204ENST00000375254 EBF3Q9H4W6 596 aa6.66□□□□□ -1.34
UBR4-204ENST00000375254 NCOA2Q15596 1464 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 LOC102724428A0A0B4J2F2 783 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 CDC7O00311 574 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 TBX1O43435 398 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 MYCLP12524 364 aaPredicted RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 POLR2CP19387 275 aaPredicted RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 ETV6P41212 452 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 SIK1P57059 783 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 ARHGAP36Q6ZRI8 547 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 TMEM192Q8IY95 271 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 PHACTR4Q8IZ21 702 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 LARGE2Q8N3Y3 721 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 REEP4Q9H6H4 257 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 CLEC11AQ9Y240 323 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 RPL36Q9Y3U8 105 aaKnown RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 ZMYM2Q9UBW7 1377 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 BCKDKO14874 412 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 SVBPQ8N300 66 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 ATG4AQ8WYN0 398 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 SERPINB7O75635 380 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 CDH11P55287 796 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 KCNA10Q16322 511 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 TIGD6Q17RP2 521 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 PHF10Q8WUB8 498 aaKnown RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 C11orf24Q96F05 449 aaPredicted RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 C14orf105Q9NVL8 296 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 PAQR5Q9NXK6 330 aaPredicted RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 HACD1B0YJ81 288 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 MCIDASD6RGH6 385 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 PAHP00439 452 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 CLEC16AQ2KHT3 1053 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 TIGD2Q4W5G0 525 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 ACSBG2Q5FVE4 666 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 EARS2Q5JPH6 523 aaKnown RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 STXBP5Q5T5C0 1151 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 PAPD4Q6PIY7 484 aaKnown RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 ARL6IP6Q8N6S5 226 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 STAG3L4Q8TBR4 150 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 ZDHHC12Q96GR4 267 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 INO80BQ9C086 356 aaPredicted RBP6.65□□□□□ -1.34
UBR4-204ENST00000375254 POMPQ9Y244 141 aa6.65□□□□□ -1.34
UBR4-204ENST00000375254 MGAT4DA6NG13 374 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms