RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 AURKCQ9UQB9 309 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 SCN10AQ9Y5Y9 1956 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 FAM72CH0Y354 149 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 H0YJX3 145 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 PSMD12O00232 456 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-203ENST00000374877 TPST1O60507 370 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 STAU1O95793 577 aaKnown RBP11.18□□□□□ -0.62
CCDC40-203ENST00000374877 TFPTP0C1Z6 253 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 SLC7A1P30825 629 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 MPP1Q00013 466 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 PPP1R3AQ16821 1122 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 FAM72AQ5TYM5 149 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 FAM72DQ6L9T8 149 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 TTC33Q6PID6 262 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-203ENST00000374877 CHSY3Q70JA7 882 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 RPS27LQ71UM5 84 aaKnown RBP11.18□□□□□ -0.62
CCDC40-203ENST00000374877 FAM72BQ86X60 149 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 CROCCP3Q8IVE0 287 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 DENND6AQ8IWF6 608 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 SMYD1Q8NB12 490 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 C18orf25Q96B23 403 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-203ENST00000374877 BIRC8Q96P09 236 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 GMPR2Q9P2T1 348 aaKnown RBP11.18□□□□□ -0.62
CCDC40-203ENST00000374877 SLC8A2Q9UPR5 921 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 MOXD2PA6NHM9 499 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 SOCS2O14508 198 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 MRASO14807 208 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 UBDO15205 165 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 TREHO43280 583 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 TSPAN1O60635 241 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 AHSGP02765 367 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 ASGR1P07306 291 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 GNAO1P09471 354 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 DARSP14868 501 aaKnown RBP11.18□□□□□ -0.62
CCDC40-203ENST00000374877 GRIA3P42263 894 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 PAFAH1B3Q15102 231 aaKnown RBP11.18□□□□□ -0.62
CCDC40-203ENST00000374877 KCNA10Q16322 511 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 CNSTQ6PJW8 725 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 RNF135Q8IUD6 432 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 FAM110BQ8TC76 370 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 CANT1Q8WVQ1 401 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 ISOC1Q96CN7 298 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 RANBP9Q96S59 729 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 FAM49AQ9H0Q0 323 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-203ENST00000374877 CDC14AQ9UNH5 594 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 SH3PXD2BA1X283 911 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 FBP2O00757 339 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 AXLP30530 894 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 CD68P34810 354 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 ETFBP38117 255 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 HADHAP40939 763 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 NAA20P61599 178 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 TUBA4AP68366 448 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 ZBTB17Q13105 803 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 MAPRE2Q15555 327 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 ANKDD1AQ495B1 522 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 ARHGAP17Q68EM7 881 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 PDZD4Q76G19 769 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 PIGZQ86VD9 579 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 CEP97Q8IW35 865 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 TXNDC5Q8NBS9 432 aaKnown RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 OR9I1Q8NGQ6 314 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 HM13Q8TCT9 377 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 USP33Q8TEY7 942 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 GIPC3Q8TF64 312 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 C12orf43Q96C57 262 aaKnown RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 ZMAT2Q96NC0 199 aaKnown RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 ANKRD60Q9BZ19 345 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 SH3GLB1Q9Y371 365 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 MAGEB16A2A368 324 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 TMX2-CTNND1H3BSU7 103 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 GIPC1O14908 333 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 SRP72O76094 671 aaKnown RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 HSPA1AP0DMV8 641 aaKnown RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 HSPA1BP0DMV9 641 aaKnown RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 STMN1P16949 149 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 GABRB3P28472 473 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 ACADSBP45954 432 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 NPY2RP49146 381 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 SLC7A2P52569 658 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 PLK1P53350 603 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 CRYBB1P53674 252 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-203ENST00000374877 SLC5A3P53794 718 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 TPI1P60174 286 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 CBX3Q13185 183 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 LRP8Q14114 963 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 SLC44A4Q53GD3 710 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 TSTD2Q5T7W7 516 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 SYPL2Q5VXT5 272 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 FAM219BQ5XKK7 198 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 DHFR2Q86XF0 187 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 NT5DC4Q86YG4 428 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 CPNE9Q8IYJ1 553 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 DNAJB3Q8WWF6 145 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 PPP1R14BQ96C90 147 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 THAP11Q96EK4 314 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 SEZ6LQ9BYH1 1024 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 DNAI2Q9GZS0 605 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 FAIMQ9NVQ4 179 aa11.17□□□□□ -0.62
CCDC40-203ENST00000374877 SNTG2Q9NY99 539 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms