RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 WNT9AO14904 365 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PPP1R12AO14974 1030 aaPredicted RBP21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TSPAN6O43657 245 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PTPN7P35236 360 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 CSNK1EP49674 416 aaKnown RBP21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 RACK1P63244 317 aaKnown RBP21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 IFI35P80217 286 aaPredicted RBP21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ARHGAP8P85298 464 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ITKQ08881 620 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 GSE1Q14687 1217 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 UGP2Q16851 508 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 RSPO4Q2I0M5 234 aaPredicted RBP21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ZNF284Q2VY69 593 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 RALGPS1Q5JS13 557 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 FAM182AQ5T1J6 154 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SEL1L3Q68CR1 1132 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 BRAT1Q6PJG6 821 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 P3H4Q92791 437 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ECHDC3Q96DC8 303 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 HES6Q96HZ4 224 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SLC6A18Q96N87 628 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 IL12RB2Q99665 862 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SEMA3CQ99985 751 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 OSBPL8Q9BZF1 889 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 AMACRQ9UHK6 382 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 EFR3BQ9Y2G0 817 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PCDHGC4Q9Y5F7 938 aa21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 UPK3BL1B0FP48 263 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 UPK3BL2E5RIL1 263 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 NEMP1O14524 444 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ARHGAP33O14559 1287 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 NEBLO76041 1014 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 HLA-DQB2P05538 268 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PTMAP06454 111 aaKnown RBP21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ENGP17813 658 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 XPAP23025 273 aaPredicted RBP21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 NUDT1P36639 197 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 CETN2P41208 172 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SUOXP51687 545 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ZNF211Q13398 564 aaPredicted RBP21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TMEM259Q4ZIN3 620 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 CFAP58Q5T655 872 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 CNTD1Q8N815 330 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 HAUS1Q96CS2 278 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SERAC1Q96JX3 654 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 EDEM2Q9BV94 578 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 POLR1EQ9GZS1 481 aaKnown RBP21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 KCNF1Q9H3M0 494 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 DMTF1Q9Y222 760 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ATP8A1Q9Y2Q0 1164 aa21.17■□□□□ 0.98
MAP1LC3A-202ENST00000374837 KMT2BQ9UMN6 2715 aaPredicted RBP21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TNRC6BQ9UPQ9 1833 aaKnown RBP21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 A0A1B0GVT2 93 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SLC31A1O15431 190 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 HTRA2O43464 458 aaPredicted RBP21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PRLRP16471 622 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 AFF3P51826 1226 aaKnown RBP21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 RPS21P63220 83 aaKnown RBP21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 BNC1Q01954 994 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 DSC2Q02487 901 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 NIPAL4Q0D2K0 466 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TRAF2Q12933 501 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ZBTB17Q13105 803 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 IHHQ14623 411 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PRKD1Q15139 912 aaPredicted RBP21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SETMARQ53H47 684 aaPredicted RBP21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ALG1LQ6GMV1 187 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 KIAA1161Q6NSJ0 714 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ARRDC2Q8TBH0 407 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TFB1MQ8WVM0 346 aaKnown RBP21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PCDH12Q9NPG4 1184 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 AASDHPPTQ9NRN7 309 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SEPT10Q9P0V9 454 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TTLL3Q9Y4R7 772 aa21.16■□□□□ 0.98
MAP1LC3A-202ENST00000374837 IGLON5A6NGN9 336 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 APOC4-APOC2K7ER74 178 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 CDX4O14627 284 aaPredicted RBP21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SOCS5O75159 536 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 APOC2P02655 101 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 WNT1P04628 370 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PRKCGP05129 697 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SYPP08247 313 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 CES1P23141 567 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 GRIA4P48058 902 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 FGL2Q14314 439 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TEAD4Q15561 434 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TMEM52BQ4KMG9 183 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 STPG1Q5TH74 334 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 CCDC181Q5TID7 509 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 NAPEPLDQ6IQ20 393 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 LAYNQ6UX15 382 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ZC3H18Q86VM9 953 aaKnown RBP21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 NETO1Q8TDF5 533 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 UBE2Q2Q8WVN8 375 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 C1QTNF2Q9BXJ5 285 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SLC17A9Q9BYT1 436 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 CEP41Q9BYV8 373 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 HAUS2Q9NVX0 235 aa21.15■□□□□ 0.98
MAP1LC3A-202ENST00000374837 A0A1W2PR77 199 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms