RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 CA4P22748 312 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 NBL1P41271 181 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 CD86P42081 329 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 PAFAH1B1P43034 410 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 ADPRHP54922 357 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 TAS2R38P59533 333 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 RPL26P61254 145 aaKnown RBP11.46□□□□□ -0.57
HSPG2-202ENST00000374676 TRAF2Q12933 501 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 SNX1Q13596 522 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 UGP2Q16851 508 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 P3H1Q32P28 736 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 PLK5Q496M5 336 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 ARMC12Q5T9G4 340 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 NEK5Q6P3R8 708 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 TTC7BQ86TV6 843 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 FAM124AQ86V42 546 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 CADM4Q8NFZ8 388 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 OR2T34Q8NGX1 318 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 OR14C36Q8NHC7 312 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 ATL2Q8NHH9 583 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 PPP1R2P1Q96PQ5 205 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 GPR174Q9BXC1 333 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 DUSP15Q9H1R2 295 aaPredicted RBP11.46□□□□□ -0.57
HSPG2-202ENST00000374676 EPC1Q9H2F5 836 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 PREBQ9HCU5 417 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 FAM153AQ9UHL3 310 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 TPX2Q9ULW0 747 aaKnown RBP11.46□□□□□ -0.57
HSPG2-202ENST00000374676 PHTF1Q9UMS5 762 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 RPL26L1Q9UNX3 145 aaKnown RBP11.46□□□□□ -0.57
HSPG2-202ENST00000374676 PPIL1Q9Y3C6 166 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 R4GN57 208 aa11.46□□□□□ -0.57
HSPG2-202ENST00000374676 FAM186AA6NE01 2351 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 GOLGA6L10A0A0M3HER8 536 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 UPK3BL1B0FP48 263 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 UPK3BL2E5RIL1 263 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 TSPAN6O43657 245 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 RHOBTB1O94844 696 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 PGLSO95336 258 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 PRLP01236 227 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 EPOP01588 193 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 NFKBIAP25963 317 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 ABL2P42684 1182 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 KCNJ1P48048 391 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 GDF10P55107 478 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 RPL6Q02878 288 aaKnown RBP11.45□□□□□ -0.58
HSPG2-202ENST00000374676 LMNB2Q03252 620 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 SRSF5Q13243 272 aaKnown RBP11.45□□□□□ -0.58
HSPG2-202ENST00000374676 SIM2Q14190 667 aaPredicted RBP11.45□□□□□ -0.58
HSPG2-202ENST00000374676 PARP6Q2NL67 630 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 FAM182AQ5T1J6 154 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 CFAP58Q5T655 872 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 PMS2CLQ68D20 193 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 CEP68Q76N32 757 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 LPCAT2Q7L5N7 544 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 ZSWIM9Q86XI8 627 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 KLHDC8BQ8IXV7 354 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.45□□□□□ -0.58
HSPG2-202ENST00000374676 SPATA22Q8NHS9 363 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 CCDC110Q8TBZ0 833 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 PIH1D2Q8WWB5 315 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 FOXJ1Q92949 421 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 MAGOHBQ96A72 148 aaKnown RBP11.45□□□□□ -0.58
HSPG2-202ENST00000374676 CAPZA3Q96KX2 299 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 RBM15Q96T37 977 aaKnown RBP eCLIP11.45□□□□□ -0.585e-6■■□□□ 11.5
HSPG2-202ENST00000374676 AP1M1Q9BXS5 423 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 TDRD1Q9BXT4 1180 aaKnown RBP11.45□□□□□ -0.58
HSPG2-202ENST00000374676 GBA3Q9H227 469 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 SMARCAL1Q9NZC9 954 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 RSPH14Q9UHP6 348 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 FEZ2Q9UHY8 353 aaPredicted RBP11.45□□□□□ -0.58
HSPG2-202ENST00000374676 PCDHB9Q9Y5E1 797 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 FADS3Q9Y5Q0 445 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 ZNF292O60281 2723 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 LRRK1Q38SD2 2015 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 RALGAPA1Q6GYQ0 2036 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 DMDP11532 3685 aa11.45□□□□□ -0.58
HSPG2-202ENST00000374676 TBC1D3DA0A087WVF3 549 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TBC1D3IA0A087WXS9 549 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TBC1D3EA0A087X179 549 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TBC1D3KA0A087X1G2 549 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TBC1D3FA6NER0 549 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 METTL12A8MUP2 240 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TBC1D3LB9A6J9 549 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 PDE2AO00408 941 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 PHF2O75151 1096 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 ANXA9O76027 345 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 MT-CYBP00156 380 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 CPP00450 1065 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 PDHA1P08559 390 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TBC1D3HP0C7X1 549 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 XPAP23025 273 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 ACTN2P35609 894 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 COILP38432 576 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 FNTAP49354 379 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 CCR5P51681 352 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 GEMP55040 296 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 CDK18Q07002 472 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 ELP6Q0PNE2 266 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 MPP3Q13368 585 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms