RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 TDRD1Q9BXT4 1180 aaKnown RBP17.02■□□□□ 0.31
PTPN20-203ENST00000374342 DNMT3BQ9UBC3 853 aaKnown RBP17.02■□□□□ 0.31
PTPN20-203ENST00000374342 LHX3Q9UBR4 397 aa17.02■□□□□ 0.31
PTPN20-203ENST00000374342 FCF1Q9Y324 198 aaKnown RBP17.02■□□□□ 0.31
PTPN20-203ENST00000374342 OR51B4Q9Y5P0 310 aa17.02■□□□□ 0.31
PTPN20-203ENST00000374342 ARL5AQ9Y689 179 aa17.02■□□□□ 0.31
PTPN20-203ENST00000374342 BUD23O43709 281 aaKnown RBP17.01■□□□□ 0.31
PTPN20-203ENST00000374342 PLIN3O60664 434 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 CLASP2O75122 1294 aaKnown RBP17.01■□□□□ 0.31
PTPN20-203ENST00000374342 FGF19O95750 216 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 CA3P07451 260 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 BPGMP07738 259 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 HADHAP40939 763 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 CD151P48509 253 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 ARSDP51689 593 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 EPHA5P54756 1037 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 RHOAP61586 193 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 PRAMEP78395 509 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 TMPRSS15P98073 1019 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 OVGP1Q12889 678 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 USP10Q14694 798 aaKnown RBP17.01■□□□□ 0.31
PTPN20-203ENST00000374342 SLC5A9Q2M3M2 681 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 FAM109BQ6ICB4 259 aaPredicted RBP17.01■□□□□ 0.31
PTPN20-203ENST00000374342 RAPH1Q70E73 1250 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 SLC41A1Q8IVJ1 513 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 TRIM42Q8IWZ5 723 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 CMTM8Q8IZV2 173 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 APCDD1Q8J025 514 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 RMDN1Q96DB5 314 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 NPHS2Q9NP85 383 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 FBXO6Q9NRD1 293 aaPredicted RBP17.01■□□□□ 0.31
PTPN20-203ENST00000374342 ABCF3Q9NUQ8 709 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 ZNF358Q9NW07 568 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 SIRPGQ9P1W8 387 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 KLHL14Q9P2G3 628 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 PRDM4Q9UKN5 801 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 FBXO5Q9UKT4 447 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 MYOFQ9NZM1 2061 aa17.01■□□□□ 0.31
PTPN20-203ENST00000374342 MYO7AQ13402 2215 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 FAM95CA0A1B0GW59 222 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 CCT8L1PA6NM43 557 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 PHGDHO43175 533 aaKnown RBP17■□□□□ 0.31
PTPN20-203ENST00000374342 MOSPD3O75425 235 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 DDX6P26196 483 aaKnown RBP eCLIP17■□□□□ 0.31
PTPN20-203ENST00000374342 INSCQ1MX18 579 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 ZNF697Q5TEC3 545 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 PTAR1Q7Z6K3 402 aaPredicted RBP17■□□□□ 0.31
PTPN20-203ENST00000374342 LPCAT1Q8NF37 534 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 OR6P1Q8NGX9 317 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 GABPB2Q8TAK5 448 aaPredicted RBP17■□□□□ 0.31
PTPN20-203ENST00000374342 CALML6Q8TD86 181 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 HDAC10Q969S8 669 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 E2F7Q96AV8 911 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 ALG14Q96F25 216 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 DNAJC1Q96KC8 554 aaKnown RBP17■□□□□ 0.31
PTPN20-203ENST00000374342 RMDN2Q96LZ7 410 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 C2orf49Q9BVC5 232 aaPredicted RBP17■□□□□ 0.31
PTPN20-203ENST00000374342 TMEM216Q9P0N5 145 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 CLEC4EQ9ULY5 219 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 RAI2Q9Y5P3 530 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 AURKAO14965 403 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 BIRC5O15392 142 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 SLC4A1P02730 911 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 PROCP04070 461 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 C2P06681 752 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 TROVE2P10155 538 aaKnown RBP eCLIP17■□□□□ 0.31
PTPN20-203ENST00000374342 CES1P23141 567 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 PGGT1BP53609 377 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 NTHL1P78549 312 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 LMAN2Q12907 356 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 TAF1BQ53T94 588 aaPredicted RBP17■□□□□ 0.31
PTPN20-203ENST00000374342 C9orf50Q5SZB4 431 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 ATXN7L2Q5T6C5 722 aaPredicted RBP17■□□□□ 0.31
PTPN20-203ENST00000374342 TRPM8Q7Z2W7 1104 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 PLD6Q8N2A8 252 aaKnown RBP17■□□□□ 0.31
PTPN20-203ENST00000374342 GPATCH11Q8N954 259 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 RIN3Q8TB24 985 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 CCT6BQ92526 530 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 ELMO2Q96JJ3 720 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 PLCD4Q9BRC7 762 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 PCDHGC4Q9Y5F7 938 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 SPO11Q9Y5K1 396 aa17■□□□□ 0.31
PTPN20-203ENST00000374342 OR51F1A6NGY5 319 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 KLF11O14901 512 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 PER2O15055 1255 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 SLC7A4O43246 635 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 XYLBO75191 536 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 CYBBP04839 570 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 GSTA1P08263 222 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 HOXA9P31269 272 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 BST1Q10588 318 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 TRAF2Q12933 501 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 LAMB3Q13751 1172 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 PTPRCAPQ14761 206 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 PCLAFQ15004 111 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 SPRED3Q2MJR0 410 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 FASTKD1Q53R41 847 aaKnown RBP16.99■□□□□ 0.31
PTPN20-203ENST00000374342 INO80DQ53TQ3 878 aaPredicted RBP16.99■□□□□ 0.31
PTPN20-203ENST00000374342 ATG16L1Q676U5 607 aa16.99■□□□□ 0.31
PTPN20-203ENST00000374342 ZCCHC23Q6ZST2 131 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms