RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 C11orf49Q9H6J7 331 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 CLK4Q9HAZ1 481 aaKnown RBP11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 ZNHIT2Q9UHR6 403 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 CDH9Q9ULB4 789 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 H7C4K7 107 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 PLOD2O00469 737 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 URODP06132 367 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 ACRP10323 421 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 NFKBIAP25963 317 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 KPNA1P52294 538 aaPredicted RBP11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 SESN2P58004 480 aaPredicted RBP11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 SOX4Q06945 474 aaPredicted RBP11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 PTK2BQ14289 1009 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 TIGD5Q53EQ6 642 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 PIGGQ5H8A4 983 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 MTX3Q5HYI7 312 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 LCLAT1Q6UWP7 414 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 CDKL2Q92772 493 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 NPAS2Q99743 824 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 EBNA1BP2Q99848 306 aaKnown RBP11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 TRIM62Q9BVG3 475 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 OSBPL11Q9BXB4 747 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 SLC2A11Q9BYW1 496 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 PCDHAC1Q9H158 963 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 CDH19Q9H159 772 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 SDCBP2Q9H190 292 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 AP4S1Q9Y587 144 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 FADS3Q9Y5Q0 445 aa11.29□□□□□ -0.6
RPRD1B-201ENST00000373433 WDR27A2RRH5 827 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 FAM159BA6NKW6 160 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 PARNO95453 639 aaKnown RBP11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 ZNF26P17031 533 aaPredicted RBP11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 C1QTNF8P60827 252 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 SLC6A3Q01959 620 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 CD300CQ08708 224 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 EGFLAMQ63HQ2 1017 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 GPR180Q86V85 440 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 PCDH20Q8N6Y1 951 aaKnown RBP11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 DLG3Q92796 817 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 HEPHQ9BQS7 1158 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 SARS2Q9NP81 518 aaKnown RBP11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 DCDC2Q9UHG0 476 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 PRSS51A0A1B0GVH4 220 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 TCRBV5S1A1TA0A578 114 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 ZNF195O14628 629 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 CAPN15O75808 1086 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 ATE1O95260 518 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 CLTBP09497 229 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 OR4Q2P0C623 313 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 USP17L7P0C7H9 530 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 CKMT2P17540 419 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 PRDX6P30041 224 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 BOLA3Q53S33 107 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 SH3PXD2AQ5TCZ1 1133 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 FIBCD1Q8N539 461 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 WDTC1Q8N5D0 677 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 NIPA2Q8N8Q9 360 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 HNRNPABQ99729 332 aaKnown RBP11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 SLC29A1Q99808 456 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 ULBP1Q9BZM6 244 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 LHX5Q9H2C1 402 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 PCDHB5Q9Y5E4 795 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 PCDHB12Q9Y5F1 795 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 OTOFQ9HC10 1997 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 HCRTO43612 131 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 WEE1P30291 646 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 ABCG1P45844 678 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 NR1D2Q14995 579 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 C15orf59Q2T9L4 293 aaPredicted RBP11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 ZBTB49Q6ZSB9 765 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 FAM183BPQ6ZVS7 135 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 TMEM102Q8N9M5 508 aaPredicted RBP11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 C17orf50Q8WW18 174 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 NOL11Q9H8H0 719 aaKnown RBP11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 OLAHQ9NV23 265 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 TBC1D13Q9NVG8 400 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 PSAT1Q9Y617 370 aa11.28□□□□□ -0.6
RPRD1B-201ENST00000373433 MYBPHLA2RUH7 354 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 NOL3O60936 208 aaKnown RBP11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 VAPBO95292 243 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 MPSTP25325 297 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 DPP6P42658 865 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 ITGADQ13349 1161 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 EML3Q32P44 896 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 ZNF829Q3KNS6 432 aaPredicted RBP11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 RAB6CQ53S08 254 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 FGD3Q5JSP0 725 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 UBXN11Q5T124 520 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 C6orf183Q5T699 404 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 EPGNQ6UW88 154 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 CES3Q6UWW8 571 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 SETD3Q86TU7 594 aaPredicted RBP11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 NETO2Q8NC67 525 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 MYLPFQ96A32 169 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 PABPC5Q96DU9 382 aaKnown RBP11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 BCO2Q9BYV7 579 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 RAB6CQ9H0N0 254 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 CCDC68Q9H2F9 335 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 CXorf21Q9HAI6 301 aa11.27□□□□□ -0.6
RPRD1B-201ENST00000373433 VPS45Q9NRW7 570 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms