RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ACTR3P61158 418 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ELF3P78545 371 aaPredicted RBP11.6□□□□□ -0.55
VCL-202ENST00000372755 C15orf59Q2T9L4 293 aaPredicted RBP11.6□□□□□ -0.55
VCL-202ENST00000372755 PPP1R15BQ5SWA1 713 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 NAIF1Q69YI7 327 aaPredicted RBP11.6□□□□□ -0.55
VCL-202ENST00000372755 SERPINA13PQ6UXR4 307 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ARHGAP36Q6ZRI8 547 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 S100ZQ8WXG8 99 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 TEFMQ96QE5 360 aaKnown RBP11.6□□□□□ -0.55
VCL-202ENST00000372755 ZNF670Q9BS34 389 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ING4Q9UNL4 249 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 MRPS7Q9Y2R9 242 aaKnown RBP11.6□□□□□ -0.55
VCL-202ENST00000372755 MCIDASD6RGH6 385 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 FFAR3O14843 346 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 GPR42O15529 346 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 FKBP1AP62942 108 aaKnown RBP11.6□□□□□ -0.55
VCL-202ENST00000372755 MRPS6P82932 125 aaKnown RBP11.6□□□□□ -0.55
VCL-202ENST00000372755 CELF3Q5SZQ8 465 aaKnown RBP11.6□□□□□ -0.55
VCL-202ENST00000372755 FBXL16Q8N461 479 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 HEXDCQ8WVB3 486 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.6□□□□□ -0.551e-7■■■□□ 15
VCL-202ENST00000372755 MADDQ8WXG6 1647 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 CAMSAP1Q5T5Y3 1602 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 FAM237BA0A1B0GVD1 139 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 GSAPA4D1B5 854 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 H3BNH8 94 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 TAF4O00268 1085 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 IDH3BO43837 385 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 OR10H3O60404 316 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 PRMT3O60678 531 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ITGAVP06756 1048 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 HGFP14210 728 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 PRKCIP41743 596 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 GALNT3Q14435 633 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ZNF846Q147U1 533 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 PTGES3Q15185 160 aaKnown RBP11.6□□□□□ -0.55
VCL-202ENST00000372755 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.6□□□□□ -0.55
VCL-202ENST00000372755 LRRC17Q8N6Y2 441 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 MARK4Q96L34 752 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ZNF354BQ96LW1 612 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 RNF157Q96PX1 679 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 FTHL17Q9BXU8 183 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 BRD9Q9H8M2 597 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 IL17RBQ9NRM6 502 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 MRTO4Q9UKD2 239 aaKnown RBP11.6□□□□□ -0.55
VCL-202ENST00000372755 FSBPO95073 299 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 CST1P01037 141 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 IFNGP01579 166 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ASGR1P07306 291 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 CHRNGP07510 517 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ZSCAN5DPP0CG00 497 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 TBX2Q13207 712 aaPredicted RBP11.6□□□□□ -0.55
VCL-202ENST00000372755 TTC7BQ86TV6 843 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 DENND1CQ8IV53 801 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 RNPEPL1Q9HAU8 725 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 SLC35C2Q9NQQ7 365 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 PCYOX1Q9UHG3 505 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ITGB1BP2Q9UKP3 347 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ZNF510Q9Y2H8 683 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 IRAK3Q9Y616 596 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 STX16-NPEPL1H3BU86 382 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 STX16O14662 325 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 SLC35G4P0C7Q5 338 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 AKIRIN2Q53H80 203 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 DNAJB14Q8TBM8 379 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 WDR60Q8WVS4 1066 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 TSPAN18Q96SJ8 248 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 SNRNP25Q9BV90 132 aaKnown RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 LRMDAQ9H2I8 198 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 NR1H2P55055 460 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 PTPRNQ16849 979 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 TMEM199Q8N511 208 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 EPS8L1Q8TE68 723 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 HDAC7Q8WUI4 952 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 ZHX1-C8orf76Q96EF9 292 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 FERD3LQ96RJ6 166 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 CLCC1Q96S66 551 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 ZFP14Q9HCL3 533 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 SSR3Q9UNL2 185 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 RBM7Q9Y580 266 aaKnown RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 ABCA6Q8N139 1617 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 CLUHO75153 1309 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 ATXN2Q99700 1313 aaKnown RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 TCRBV5S4A2TA0A5A2 114 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 LIN7AO14910 233 aaPredicted RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 IDO1P14902 403 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 TAL1P17542 331 aaPredicted RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 LPOP22079 712 aaPredicted RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 ADSLP30566 484 aaPredicted RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 SLC25A3Q00325 362 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 PRKG2Q13237 762 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 LIPMQ5VYY2 423 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 CREG2Q8IUH2 290 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 KBTBD2Q8IY47 623 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 BPIFA1Q9NP55 256 aa11.59□□□□□ -0.55
VCL-202ENST00000372755 GPN3Q9UHW5 284 aaPredicted RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 ZNF214Q9UL59 606 aaPredicted RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 MRPS33Q9Y291 106 aaKnown RBP11.59□□□□□ -0.55
VCL-202ENST00000372755 MRPS23Q9Y3D9 190 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms