RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 PM20D2Q8IYS1 436 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 CCDC54Q8NEL0 328 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 MCOLN3Q8TDD5 553 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 BAP1Q92560 729 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 CCDC177Q9NQR7 707 aaPredicted RBP15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 TAS2R13Q9NYV9 303 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 ZNF214Q9UL59 606 aaPredicted RBP15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 ABT1Q9ULW3 272 aaKnown RBP15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 ISPDA4D126 451 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 CYP11B1P15538 503 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 PCSK1P29120 753 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 NTSP30990 170 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 CES3Q6UWW8 571 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 STRBPQ96SI9 672 aaKnown RBP15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 SPATA5L1Q9BVQ7 753 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 DDX3XO00571 662 aaKnown RBP eCLIP15.39■□□□□ 0.057e-9■■■■□ 21.2
GTF3C4-201ENST00000372146 AIREO43918 545 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 PRKACAP17612 351 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 ILF3Q12906 894 aaKnown RBP eCLIP15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 AHSA2Q719I0 299 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 RASGEF1AQ8N9B8 481 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 A0A0A6YYK5 440 aaPredicted RBP15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 SLC30A4O14863 429 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 ZNF3P17036 446 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 MSX2P35548 267 aaPredicted RBP15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 POTEHQ6S545 545 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 TRMT11Q7Z4G4 463 aaKnown RBP15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 SLC4A11Q8NBS3 891 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 CHST4Q8NCG5 386 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 OPTCQ9UBM4 332 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 TTC34A8MYJ7 566 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 TRIM38O00635 465 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 TOR1BO14657 336 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 PPM1AP35813 382 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 PRKCEQ02156 737 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 AP5B1Q2VPB7 878 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 HERC6Q8IVU3 1022 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 ANKFN1Q8N957 763 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 SLC22A4Q9H015 551 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 SLC38A7Q9NVC3 462 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 TBC1D13Q9NVG8 400 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 ABI2Q9NYB9 513 aaPredicted RBP15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 AURKAO14965 403 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 UGT2B17O75795 530 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 ITGA4P13612 1032 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 USP43Q70EL4 1123 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 P2RY8Q86VZ1 359 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 GTF3C4Q9UKN8 822 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 PEX16Q9Y5Y5 336 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 SPATA31E1Q6ZUB1 1445 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.39■□□□□ 0.059e-9■■■■■ 31
GTF3C4-201ENST00000372146 PIGNO95427 931 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 HMGCRP04035 888 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 CSH1P0DML2 217 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 CSH2P0DML3 217 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 ARHGAP27Q6ZUM4 889 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 CARNMT1Q8N4J0 409 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 HM13Q8TCT9 377 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 PTTG2Q9NZH5 202 aa15.39■□□□□ 0.05
GTF3C4-201ENST00000372146 REM1O75628 298 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 SLC6A2P23975 617 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 PRKAG1P54619 331 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 CRY2Q49AN0 593 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 FAM92BQ6ZTR7 304 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 CFAP206Q8IYR0 622 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 SCGB1D2O95969 90 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 CCNG2Q16589 344 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 PPP1R15BQ5SWA1 713 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 SLITRK1Q96PX8 696 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 CEP41Q9BYV8 373 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 KIAA1257Q9ULG3 409 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 TTC37Q6PGP7 1564 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 TTC3P53804 2025 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 TRIM64A6NGJ6 449 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 TRIM64BA6NI03 449 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 ITGB3P05106 788 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 MYBL2P10244 700 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 TYMPP19971 482 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 MAGEA8P43361 318 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 ZNF45Q02386 682 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 PCID2Q5JVF3 399 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 TDRD10Q5VZ19 366 aaKnown RBP15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 QSOX2Q6ZRP7 698 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 RUSC1Q9BVN2 902 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 M0QX08 132 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 ZNF208O43345 1280 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 HSD17B12Q53GQ0 312 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 FRRS1Q6ZNA5 592 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 MPP5Q8N3R9 675 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 OXR1Q8N573 874 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 MUSKO15146 869 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 SHBGP04278 402 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 MBOAT7Q96N66 472 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 CDHR5Q9HBB8 845 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 FABP12A6NFH5 140 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 PPP1R3GB7ZBB8 358 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 PLATP00750 562 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 PTPN6P29350 595 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 LIPEQ05469 1076 aa15.38■□□□□ 0.05
GTF3C4-201ENST00000372146 PQLC1Q8N2U9 271 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms