RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 ROPN1BQ9BZX4 212 aaPredicted RBP18.63■□□□□ 0.57
VEGFA-206ENST00000372077 ROPN1Q9HAT0 212 aaPredicted RBP18.63■□□□□ 0.57
VEGFA-206ENST00000372077 KLHL14Q9P2G3 628 aa18.63■□□□□ 0.57
VEGFA-206ENST00000372077 CHMP2BQ9UQN3 213 aa18.63■□□□□ 0.57
VEGFA-206ENST00000372077 DNAJC8O75937 253 aaPredicted RBP18.63■□□□□ 0.57
VEGFA-206ENST00000372077 FAM155BO75949 473 aa18.63■□□□□ 0.57
VEGFA-206ENST00000372077 TMCC1O94876 653 aa18.63■□□□□ 0.57
VEGFA-206ENST00000372077 ADRA1DP25100 572 aa18.63■□□□□ 0.57
VEGFA-206ENST00000372077 GRIA1P42261 906 aa18.63■□□□□ 0.57
VEGFA-206ENST00000372077 LRRC8BQ6P9F7 803 aa18.63■□□□□ 0.57
VEGFA-206ENST00000372077 ADIPOR2Q86V24 386 aa18.63■□□□□ 0.57
VEGFA-206ENST00000372077 FAM167BQ9BTA0 163 aa18.63■□□□□ 0.57
VEGFA-206ENST00000372077 LRRC40Q9H9A6 602 aa18.63■□□□□ 0.57
VEGFA-206ENST00000372077 XAB2Q9HCS7 855 aaKnown RBP18.63■□□□□ 0.57
VEGFA-206ENST00000372077 PHTF1Q9UMS5 762 aa18.63■□□□□ 0.57
VEGFA-206ENST00000372077 SLC27A6Q9Y2P4 619 aa18.63■□□□□ 0.57
VEGFA-206ENST00000372077 MGRN1O60291 552 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 MT-CYBP00156 380 aaPredicted RBP18.62■□□□□ 0.57
VEGFA-206ENST00000372077 CR2P20023 1033 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 DSC2Q02487 901 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 ITKQ08881 620 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 HTR4Q13639 388 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 RUNX3Q13761 415 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 IHHQ14623 411 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 ITIH4Q14624 930 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 KDELC1Q6UW63 502 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 C12orf40Q86WS4 652 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 PIH1D1Q9NWS0 290 aaKnown RBP18.62■□□□□ 0.57
VEGFA-206ENST00000372077 UBP1Q9NZI7 540 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 SLC17A7Q9P2U7 560 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 NUMBLQ9Y6R0 609 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 FAM47DPA6NHR8 397 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 ANP32DO95626 131 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 MT-CO1P00395 513 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 NEFHP12036 1026 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 SERPINH1P50454 418 aaKnown RBP18.62■□□□□ 0.57
VEGFA-206ENST00000372077 MPP3Q13368 585 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 SPARCL1Q14515 664 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 CPA6Q8N4T0 437 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 TTC17Q96AE7 1141 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 CCDC77Q9BR77 488 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 VPS45Q9NRW7 570 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 LHX3Q9UBR4 397 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 ARL2BPQ9Y2Y0 163 aa18.62■□□□□ 0.57
VEGFA-206ENST00000372077 SRRM3A6NNA2 597 aaPredicted RBP18.61■□□□□ 0.57
VEGFA-206ENST00000372077 TRIM24O15164 1050 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 EZRP15311 586 aaKnown RBP18.61■□□□□ 0.57
VEGFA-206ENST00000372077 RGRP47804 291 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 DGKGP49619 791 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 SULT2A1Q06520 285 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 NR1H3Q13133 447 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 LVRNQ6Q4G3 990 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 METTL3Q86U44 580 aaKnown RBP18.61■□□□□ 0.57
VEGFA-206ENST00000372077 AHI1Q8N157 1196 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.61■□□□□ 0.57
VEGFA-206ENST00000372077 SEMA3CQ99985 751 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 TRMT61BQ9BVS5 477 aaKnown RBP18.61■□□□□ 0.57
VEGFA-206ENST00000372077 CASS4Q9NQ75 786 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 SZT2Q5T011 3432 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 TULP3O75386 442 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 ADRA1AP35348 466 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 SESN3P58005 492 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 NSUN2Q08J23 767 aaKnown RBP eCLIP18.61■□□□□ 0.57
VEGFA-206ENST00000372077 SLC14A2Q15849 920 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 TMEM215Q68D42 235 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 PRR11Q96HE9 360 aaPredicted RBP18.61■□□□□ 0.57
VEGFA-206ENST00000372077 HS3ST2Q9Y278 367 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 COL4A3Q01955 1670 aa18.61■□□□□ 0.57
VEGFA-206ENST00000372077 ARNTLO00327 626 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 FOSL2P15408 326 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 CES1P23141 567 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 GDI1P31150 447 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 CD86P42081 329 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 CTSOP43234 321 aaPredicted RBP18.6■□□□□ 0.57
VEGFA-206ENST00000372077 CLNS1AP54105 237 aaKnown RBP18.6■□□□□ 0.57
VEGFA-206ENST00000372077 GPX6P59796 221 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 GEN1Q17RS7 908 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 HHATQ5VTY9 493 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 C3orf62Q6ZUJ4 267 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 IGDCC3Q8IVU1 814 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 AGGF1Q8N302 714 aaeCLIP18.6■□□□□ 0.57
VEGFA-206ENST00000372077 WFIKKN2Q8TEU8 576 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 MRGPRX2Q96LB1 330 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 WDR83Q9BRX9 315 aaKnown RBP18.6■□□□□ 0.57
VEGFA-206ENST00000372077 TMEM109Q9BVC6 243 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 A0A0G2JND7 137 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 OLIG2Q13516 323 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 WLSQ5T9L3 541 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 MBLAC2Q68D91 279 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 NAPEPLDQ6IQ20 393 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 NUDCD1Q96RS6 583 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 SMC6Q96SB8 1091 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 FCF1Q9Y324 198 aaKnown RBP18.6■□□□□ 0.57
VEGFA-206ENST00000372077 TEX264Q9Y6I9 313 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 BRWD1Q9NSI6 2320 aa18.6■□□□□ 0.57
VEGFA-206ENST00000372077 TTC24A2A3L6 582 aaPredicted RBP18.59■□□□□ 0.57
VEGFA-206ENST00000372077 K7ERQ8 282 aa18.59■□□□□ 0.57
VEGFA-206ENST00000372077 SMAD6O43541 496 aaKnown RBP18.59■□□□□ 0.57
VEGFA-206ENST00000372077 F7P08709 466 aaPredicted RBP18.59■□□□□ 0.57
VEGFA-206ENST00000372077 SLC6A11P48066 632 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms