RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 KLHL18O94889 574 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 APBA3O96018 575 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 LINC00032P0C843 101 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 THRBP10828 461 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 CHI3L1P36222 383 aaPredicted RBP12.77□□□□□ -0.37
GPC4-201ENST00000370828 PURAQ00577 322 aaKnown RBP12.77□□□□□ -0.37
GPC4-201ENST00000370828 DNASE1L3Q13609 305 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 TDRD10Q5VZ19 366 aaKnown RBP12.77□□□□□ -0.37
GPC4-201ENST00000370828 UGT3A1Q6NUS8 523 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 MYDGFQ969H8 173 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 CENPNQ96H22 339 aaPredicted RBP12.77□□□□□ -0.37
GPC4-201ENST00000370828 KLHL1Q9NR64 748 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 TMEM216Q9P0N5 145 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 UBA2Q9UBT2 640 aaPredicted RBP12.77□□□□□ -0.37
GPC4-201ENST00000370828 VPS9D1Q9Y2B5 631 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 SHPRHQ149N8 1683 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 PPRC1Q5VV67 1664 aaKnown RBP12.77□□□□□ -0.37
GPC4-201ENST00000370828 SAGE2PA6NJ88 616 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 STX16-NPEPL1H3BU86 382 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 NCAM2O15394 837 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 AMHP03971 560 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 CETPP11597 493 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 MZF1P28698 734 aaPredicted RBP12.77□□□□□ -0.37
GPC4-201ENST00000370828 GTF2A2P52657 109 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 ZNF621Q6ZSS3 439 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 ZNF410Q86VK4 478 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 BRSK2Q8IWQ3 736 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 TUBA1CQ9BQE3 449 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 CYP3A43Q9HB55 503 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 TOR4AQ9NXH8 423 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 SLC9A8Q9Y2E8 581 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 SNCAIPQ9Y6H5 919 aa12.77□□□□□ -0.37
GPC4-201ENST00000370828 BTN3A1O00481 513 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 PAPSS1O43252 624 aaPredicted RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 CD4P01730 458 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 FTH1P02794 183 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 PRDX6P30041 224 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 FEN1P39748 380 aaKnown RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 PGDP52209 483 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 TMEM214Q6NUQ4 689 aaKnown RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 NIPAL1Q6NVV3 410 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 KLHL35Q6PF15 583 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 CNTD1Q8N815 330 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 GOLM1Q8NBJ4 401 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 NKX2-3Q8TAU0 364 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 PRRG3Q9BZD7 231 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 SYNDIG1Q9H7V2 258 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 EVLQ9UI08 416 aaPredicted RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 CYTH4Q9UIA0 394 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 MRPS7Q9Y2R9 242 aaKnown RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 C2orf81A6NN90 581 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 HAT1O14929 419 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 SERPINA1P01009 418 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 MMP10P09238 476 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 CLUP10909 449 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 RAB10P61026 200 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 SLC6A3Q01959 620 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 MYLK3Q32MK0 819 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 SUPT20HL1Q3ZLR7 823 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 VPS26BQ4G0F5 336 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 FGD3Q5JSP0 725 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 DEFB106AQ8N104 65 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 CACTIN-AS1Q8N1I8 211 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 UBE2J2Q8N2K1 259 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 ATG4CQ96DT6 458 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 ITPKCQ96DU7 683 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 CEP295NLQ96MC4 621 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 IL22Q9GZX6 179 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 HIPK3Q9H422 1215 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 CRLS1Q9UJA2 301 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 N6AMT1Q9Y5N5 214 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 FARP2O94887 1054 aaPredicted RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 ICAM1P05362 532 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 ITGB6P18564 788 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 MYL12AP19105 171 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 MAPK1P28482 360 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 S100A3P33764 101 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 TCF7P36402 384 aaPredicted RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 CAPGP40121 348 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 HALP42357 657 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 ZNF143P52747 638 aaPredicted RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 FAM131AQ6UXB0 335 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 FRMD7Q6ZUT3 714 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 RALGPS2Q86X27 583 aaPredicted RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 SP8Q8IXZ3 490 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 HS6ST3Q8IZP7 471 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 TMEM132CQ8N3T6 1108 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 NAT16Q8N8M0 369 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 MRPL57Q9BQC6 102 aaKnown RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 CORO1BQ9BR76 489 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 COPS4Q9BT78 406 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 GATA5Q9BWX5 397 aaPredicted RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 SENP6Q9GZR1 1112 aaPredicted RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 SIX2Q9NPC8 291 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 ZMAT5Q9UDW3 170 aaKnown RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 PHF24Q9UPV7 400 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 FAM50BQ9Y247 325 aa12.76□□□□□ -0.37
GPC4-201ENST00000370828 ZCCHC11Q5TAX3 1644 aaKnown RBP12.76□□□□□ -0.37
GPC4-201ENST00000370828 FAM220BPB1ANY3 271 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms