RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 CCNB1P14635 433 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 MAN1A1P33908 653 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 CTSOP43234 321 aaPredicted RBP15.17■□□□□ 0.02
LMO4-201ENST00000370542 CSNK1EP49674 416 aaKnown RBP15.17■□□□□ 0.02
LMO4-201ENST00000370542 RASSF2P50749 326 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 JAM2P57087 298 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 ST8SIA6P61647 398 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 ECT2LQ008S8 904 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 MTA1Q13330 715 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 KIF19Q2TAC6 998 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 EFHC1Q5JVL4 640 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 TTC39BQ5VTQ0 682 aaPredicted RBP15.17■□□□□ 0.02
LMO4-201ENST00000370542 RAP1GAP2Q684P5 730 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 C11orf63Q6NUN7 778 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 OLFML1Q6UWY5 402 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 SYDE1Q6ZW31 735 aaPredicted RBP15.17■□□□□ 0.02
LMO4-201ENST00000370542 JAMLQ86YT9 394 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 APCDD1Q8J025 514 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 LGI2Q8N0V4 545 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 DEFB106AQ8N104 65 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 ATP6V0D2Q8N8Y2 350 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 ZNF483Q8TF39 744 aaPredicted RBP15.17■□□□□ 0.02
LMO4-201ENST00000370542 MAIP1Q8WWC4 291 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 ALG14Q96F25 216 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 TMEM237Q96Q45 408 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 DPH5Q9H2P9 285 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 SERGEFQ9UGK8 458 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 SLCO3A1Q9UIG8 710 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 AJAP1Q9UKB5 411 aaPredicted RBP15.17■□□□□ 0.02
LMO4-201ENST00000370542 FZD4Q9ULV1 537 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 ACTL7BQ9Y614 415 aa15.17■□□□□ 0.02
LMO4-201ENST00000370542 PLXNB3Q9ULL4 1909 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 EDDM13A0A1B0GTR0 161 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 A0A1W2PPC4 97 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 A6NHS1 94 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 TTC34A8MYJ7 566 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 PCDHGA12O60330 932 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 TCEA3O75764 348 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 MOCS2O96007 188 aaPredicted RBP15.16■□□□□ 0.02
LMO4-201ENST00000370542 FGGP02679 453 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 FTH1P19P0C7X4 201 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 CCR1P32246 355 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 CTSKP43235 329 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 MSH2P43246 934 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 GALCP54803 685 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 SULT2A1Q06520 285 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 SFSWAPQ12872 951 aaKnown RBP15.16■□□□□ 0.02
LMO4-201ENST00000370542 CST6Q15828 149 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 ARHGAP44Q17R89 818 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 TSNAXIP1Q2TAA8 658 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 ACCSLQ4AC99 568 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 KIAA0895LQ68EN5 471 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 CXorf57Q6NSI4 855 aaKnown RBP15.16■□□□□ 0.02
LMO4-201ENST00000370542 PPP1R21Q6ZMI0 780 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 SLC26A9Q7LBE3 791 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 SLCO6A1Q86UG4 719 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 CHSY1Q86X52 802 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 CCDC117Q8IWD4 279 aaPredicted RBP15.16■□□□□ 0.02
LMO4-201ENST00000370542 FAM71AQ8IYT1 594 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 FRS2Q8WU20 508 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 ZFAND2BQ8WV99 257 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 INPP5DQ92835 1189 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 IGSF8Q969P0 613 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 NT5C3BQ969T7 300 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 TOR4AQ9NXH8 423 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 FBXL12Q9NXK8 326 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 KLHL14Q9P2G3 628 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 NCKAP1Q9Y2A7 1128 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 ANKRD6Q9Y2G4 727 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 PCDHB9Q9Y5E1 797 aa15.16■□□□□ 0.02
LMO4-201ENST00000370542 A0A1B0GVM2 712 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 TCAF2A6NFQ2 919 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 F5H5T6 163 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 FOXN3O00409 490 aaPredicted RBP15.15■□□□□ 0.02
LMO4-201ENST00000370542 MID1O15344 667 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 DDX3YO15523 660 aaKnown RBP15.15■□□□□ 0.02
LMO4-201ENST00000370542 FLRT2O43155 660 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 RNASEH1O60930 286 aaKnown RBP15.15■□□□□ 0.02
LMO4-201ENST00000370542 UBOX5O94941 541 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 SNUPNO95149 360 aaKnown RBP15.15■□□□□ 0.02
LMO4-201ENST00000370542 CDH5P33151 784 aaPredicted RBP15.15■□□□□ 0.02
LMO4-201ENST00000370542 FLT3P36888 993 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 OXCT1P55809 520 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 RACK1P63244 317 aaKnown RBP15.15■□□□□ 0.02
LMO4-201ENST00000370542 TEAD4Q15561 434 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 PTPN20Q4JDL3 420 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 WASHC2DQ5SRD0 308 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 FBXL22Q6P050 247 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 ARHGEF18Q6ZSZ5 1173 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 ASRGL1Q7L266 308 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 SPATA21Q7Z572 469 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 MDM1Q8TC05 714 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 PGAP3Q96FM1 320 aaPredicted RBP15.15■□□□□ 0.02
LMO4-201ENST00000370542 THOC1Q96FV9 657 aaKnown RBP15.15■□□□□ 0.02
LMO4-201ENST00000370542 CCDC86Q9H6F5 360 aaKnown RBP15.15■□□□□ 0.02
LMO4-201ENST00000370542 DDIT4Q9NX09 232 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 ZFATQ9P243 1243 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 OR51B4Q9Y5P0 310 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 RAI2Q9Y5P3 530 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 SNX11Q9Y5W9 270 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms