RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 FGF1P05230 155 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 MBL2P11226 248 aaPredicted RBP25.07■■□□□ 1.6
CLK2-203ENST00000368361 COL6A2P12110 1019 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 LEPRP48357 1165 aaKnown RBP25.07■■□□□ 1.6
CLK2-203ENST00000368361 DLG1Q12959 904 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 RIPK1Q13546 671 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 KRT72Q14CN4 511 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 FAM91A1Q658Y4 838 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 LRRC8EQ6NSJ5 796 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 CHST9Q7L1S5 443 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 CILP2Q8IUL8 1156 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 TCEAL8Q8IYN2 117 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 CMTR2Q8IYT2 770 aaKnown RBP25.07■■□□□ 1.6
CLK2-203ENST00000368361 NXNL1Q96CM4 212 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 ZNF333Q96JL9 665 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 EXOC2Q96KP1 924 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 ZFRQ96KR1 1074 aaKnown RBP25.07■■□□□ 1.6
CLK2-203ENST00000368361 NSMCE3Q96MG7 304 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 UNKQ9C0B0 810 aaKnown RBP25.07■■□□□ 1.6
CLK2-203ENST00000368361 NOD2Q9HC29 1040 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 ZNF334Q9HCZ1 680 aaPredicted RBP25.07■■□□□ 1.6
CLK2-203ENST00000368361 OR51F1A6NGY5 319 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 SLC7A4O43246 635 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 HNRNPCL1O60812 293 aaKnown RBP25.07■■□□□ 1.6
CLK2-203ENST00000368361 EPOP01588 193 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 CRABP2P29373 138 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 PPP3CCP48454 512 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 PRAMEP78395 509 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 POU4F1Q01851 419 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 ZYG11AQ6WRX3 759 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 SETD3Q86TU7 594 aaPredicted RBP25.07■■□□□ 1.6
CLK2-203ENST00000368361 MOCOSQ96EN8 888 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 GPR78Q96P69 363 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 TUBB6Q9BUF5 446 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 TRPC7Q9HCX4 862 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.07■■□□□ 1.6
CLK2-203ENST00000368361 MID2Q9UJV3 735 aa25.07■■□□□ 1.6
CLK2-203ENST00000368361 PLXNA4Q9HCM2 1894 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 TRIM43BA6NCK2 446 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 TEX28O15482 410 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 BUD23O43709 281 aaKnown RBP25.06■■□□□ 1.6
CLK2-203ENST00000368361 PIRTP0C851 137 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 SPATA31D3P0C874 917 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 ACRP10323 421 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 CALB2P22676 271 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 EPHB3P54753 998 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 ALDH18A1P54886 795 aaKnown RBP25.06■■□□□ 1.6
CLK2-203ENST00000368361 PTPRCAPQ14761 206 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 SPATA31D4Q6ZUB0 917 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 LDB1Q86U70 411 aaPredicted RBP25.06■■□□□ 1.6
CLK2-203ENST00000368361 SPNS2Q8IVW8 549 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 RDH11Q8TC12 318 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 SREK1Q8WXA9 508 aaKnown RBP25.06■■□□□ 1.6
CLK2-203ENST00000368361 TRIM43Q96BQ3 446 aaPredicted RBP25.06■■□□□ 1.6
CLK2-203ENST00000368361 PAWRQ96IZ0 340 aaKnown RBP25.06■■□□□ 1.6
CLK2-203ENST00000368361 MFSD1Q9H3U5 465 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 MRPL17Q9NRX2 175 aaKnown RBP25.06■■□□□ 1.6
CLK2-203ENST00000368361 XPR1Q9UBH6 696 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 TBC1D30Q9Y2I9 924 aa25.06■■□□□ 1.6
CLK2-203ENST00000368361 CBX4O00257 560 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 TIMP1P01033 207 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 SCNN1BP51168 640 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 SLC12A2P55011 1212 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 TUBB3Q13509 450 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 CXorf57Q6NSI4 855 aaKnown RBP25.05■■□□□ 1.6
CLK2-203ENST00000368361 TREML1Q86YW5 311 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 RNF135Q8IUD6 432 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 GABPB2Q8TAK5 448 aaPredicted RBP25.05■■□□□ 1.6
CLK2-203ENST00000368361 STYXQ8WUJ0 223 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 TRIB3Q96RU7 358 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 OLFM1Q99784 485 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 MIPEPQ99797 713 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 GATA5Q9BWX5 397 aaPredicted RBP25.05■■□□□ 1.6
CLK2-203ENST00000368361 SUDS3Q9H7L9 328 aaPredicted RBP25.05■■□□□ 1.6
CLK2-203ENST00000368361 ACSS2Q9NR19 701 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 CAPN14A8MX76 684 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 TARM1B6A8C7 271 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 KLHL2O95198 593 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 HSPA4LO95757 839 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 DNAJB1P25685 340 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 SMAD3P84022 425 aaKnown RBP25.05■■□□□ 1.6
CLK2-203ENST00000368361 RNF219Q5W0B1 726 aaPredicted RBP25.05■■□□□ 1.6
CLK2-203ENST00000368361 LONP2Q86WA8 852 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 ZNF781Q8N8C0 355 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 DNAJC1Q96KC8 554 aaKnown RBP25.05■■□□□ 1.6
CLK2-203ENST00000368361 TBATAQ96M53 351 aa25.05■■□□□ 1.6
CLK2-203ENST00000368361 MARCH4Q9P2E8 410 aaPredicted RBP25.05■■□□□ 1.6
CLK2-203ENST00000368361 TMEM114B3SHH9 223 aa25.04■■□□□ 1.6
CLK2-203ENST00000368361 ZNF195O14628 629 aa25.04■■□□□ 1.6
CLK2-203ENST00000368361 CCDC22O60826 627 aa25.04■■□□□ 1.6
CLK2-203ENST00000368361 F11P03951 625 aa25.04■■□□□ 1.6
CLK2-203ENST00000368361 LIPMQ5VYY2 423 aa25.04■■□□□ 1.6
CLK2-203ENST00000368361 YME1L1Q96TA2 773 aa25.04■■□□□ 1.6
CLK2-203ENST00000368361 MUC3BQ9H195 1237 aa25.04■■□□□ 1.6
CLK2-203ENST00000368361 STN1Q9H668 368 aaKnown RBP25.04■■□□□ 1.6
CLK2-203ENST00000368361 CD248Q9HCU0 757 aa25.04■■□□□ 1.6
CLK2-203ENST00000368361 C1RP00736 705 aa25.04■■□□□ 1.6
CLK2-203ENST00000368361 SERPINA6P08185 405 aa25.04■■□□□ 1.6
CLK2-203ENST00000368361 ESRRAP11474 423 aaPredicted RBP25.04■■□□□ 1.6
CLK2-203ENST00000368361 ZXDBP98169 803 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms