RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 TP73O15350 636 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 SLC35G4P0C7Q5 338 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 LBPP18428 481 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ZNF10P21506 573 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 FKBP1BP68106 108 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 TRIM16LQ309B1 348 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 IRF2BP2Q7Z5L9 587 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 XYLT1Q86Y38 959 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 C10orf107Q8IVU9 208 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ZNF655Q8N720 491 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 RNFT2Q96EX2 444 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 INPP4AQ96PE3 977 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 DCUN1D5Q9BTE7 237 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 PRRG3Q9BZD7 231 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 GRIP2Q9C0E4 1043 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.97□□□□□ -0.334e-27■■■□□ 15.4
PTPRK-207ENST00000368226 AGO3Q9H9G7 860 aaKnown RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ARHGAP28Q9P2N2 729 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 C9IYK1 514 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 GPR25O00155 361 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 MFSD11O43934 449 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 CLPTM1O96005 669 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 INHAP05111 366 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ITGAVP06756 1048 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ITGA2BP08514 1039 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ME2P23368 584 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 HTR1BP28222 390 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 GJA9P57773 515 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 BIKQ13323 160 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 NAB1Q13506 487 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 TAF13Q15543 124 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ZIK1Q3SY52 487 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 FAM182AQ5T1J6 154 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 PRMT9Q6P2P2 845 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 A0A1W2PPM1 405 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 PIPSLA2A3N6 862 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 H3BMM5 538 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 CDK7P50613 346 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 SEMG2Q02383 582 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 FSTL1Q12841 308 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 HYIQ5T013 277 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 SLC24A5Q71RS6 500 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 MON1AQ86VX9 555 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ST13P5Q8NFI4 369 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 ATXN2LQ8WWM7 1075 aaKnown RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 TCF25Q9BQ70 676 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 CNGB3Q9NQW8 809 aa12.97□□□□□ -0.33
PTPRK-207ENST00000368226 TNPO3Q9Y5L0 923 aaKnown RBP12.97□□□□□ -0.33
PTPRK-207ENST00000368226 VPS4BO75351 444 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 FTH1P02794 183 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 PSMA3P25788 255 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 SLC25A52Q3SY17 297 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 LBX2Q6XYB7 198 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 LRRC52Q8N7C0 313 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 RELTQ969Z4 430 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 ADI1Q9BV57 179 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 SNX15Q9NRS6 342 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 ZFP37Q9Y6Q3 630 aaPredicted RBP12.96□□□□□ -0.33
PTPRK-207ENST00000368226 CLOCKO15516 846 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 RNASEH2AO75792 299 aaKnown RBP12.96□□□□□ -0.33
PTPRK-207ENST00000368226 EPHX1P07099 455 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 EPHA3P29320 983 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 TLX1P31314 330 aaPredicted RBP12.96□□□□□ -0.33
PTPRK-207ENST00000368226 CLCN5P51795 746 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 NRG1Q02297 640 aaPredicted RBP12.96□□□□□ -0.33
PTPRK-207ENST00000368226 TRMT5Q32P41 509 aaKnown RBP12.96□□□□□ -0.33
PTPRK-207ENST00000368226 CHST9Q7L1S5 443 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 RAVER1Q8IY67 606 aaKnown RBP12.96□□□□□ -0.33
PTPRK-207ENST00000368226 C4orf32Q8N8J7 132 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 OSCP1Q8WVF1 389 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 RHOBTB2Q9BYZ6 727 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 OSER1Q9NX31 292 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 KIAA1522Q9P206 1035 aaPredicted RBP12.96□□□□□ -0.33
PTPRK-207ENST00000368226 RAB23Q9ULC3 237 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 OR6C75A6NL08 312 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 CDC25CP30307 473 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 HK2P52789 917 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 SLC9A9Q8IVB4 645 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 PARP8Q8N3A8 854 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 DGCR6LQ9BY27 220 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 ERVK-5Q9HDB9 667 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 STK39Q9UEW8 545 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 AP4S1Q9Y587 144 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 ADGRA3Q8IWK6 1321 aa12.96□□□□□ -0.33
PTPRK-207ENST00000368226 RNF225M0QZC1 329 aaPredicted RBP12.96□□□□□ -0.34
PTPRK-207ENST00000368226 TKTP29401 623 aaKnown RBP12.96□□□□□ -0.34
PTPRK-207ENST00000368226 GRIA3P42263 894 aa12.96□□□□□ -0.34
PTPRK-207ENST00000368226 SRSF11Q05519 484 aaKnown RBP12.96□□□□□ -0.34
PTPRK-207ENST00000368226 AUHQ13825 339 aaKnown RBP12.96□□□□□ -0.34
PTPRK-207ENST00000368226 MAPK11Q15759 364 aa12.96□□□□□ -0.34
PTPRK-207ENST00000368226 ALYREFQ86V81 257 aaKnown RBP12.96□□□□□ -0.34
PTPRK-207ENST00000368226 ACTRT2Q8TDY3 377 aa12.96□□□□□ -0.34
PTPRK-207ENST00000368226 UGT2B28Q9BY64 529 aa12.96□□□□□ -0.34
PTPRK-207ENST00000368226 STARD13Q9Y3M8 1113 aa12.96□□□□□ -0.34
PTPRK-207ENST00000368226 ACSL4O60488 711 aa12.96□□□□□ -0.34
PTPRK-207ENST00000368226 HGFP14210 728 aa12.96□□□□□ -0.34
PTPRK-207ENST00000368226 ZNF135P52742 658 aaPredicted RBP12.96□□□□□ -0.34
PTPRK-207ENST00000368226 PRKAA2P54646 552 aa12.96□□□□□ -0.34
PTPRK-207ENST00000368226 DGCR6Q14129 220 aa12.96□□□□□ -0.34
PTPRK-207ENST00000368226 TSHZ1Q6ZSZ6 1077 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms