RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 FAM187BQ17R55 369 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 RNF43Q68DV7 783 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 SH3GL2Q99962 352 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 TBCDQ9BTW9 1192 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 KLHL4Q9C0H6 718 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 EVLQ9UI08 416 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 GNPTGQ9UJJ9 305 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 ALS2Q96Q42 1657 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 ACSL4O60488 711 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 METTL18O95568 372 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 BPGMP07738 259 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 PSMC3P17980 439 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 PTPN3P26045 913 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 POU1F1P28069 291 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 CDC25CP30307 473 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 ELF3P78545 371 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 MRPS22P82650 360 aaKnown RBP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 PURAQ00577 322 aaKnown RBP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 INSCQ1MX18 579 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 LIPMQ5VYY2 423 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 ZDHHC24Q6UX98 284 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 CTU1Q7Z7A3 348 aaKnown RBP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 GBA3Q9H227 469 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 SRRDQ9UH36 339 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 GCATO75600 419 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 SMNDC1O75940 238 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 YBEYP58557 167 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 SLC34A1Q06495 639 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 WASHC5Q12768 1159 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 PARP15Q460N3 678 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 RAET1GQ6H3X3 334 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 TRMT10BQ6PF06 316 aaKnown RBP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 CRYBG2Q8N1P7 616 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 ARL14EPQ8N8R7 260 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 FBXO22Q8NEZ5 403 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 PSMG2Q969U7 264 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 LINGO1Q96FE5 620 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 HMCESQ96FZ2 354 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 SLC45A1Q9Y2W3 748 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 RAP2CQ9Y3L5 183 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 SRRM3A6NNA2 597 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 RGS14O43566 566 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 FSBPO95073 299 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 PARNO95453 639 aaKnown RBP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 CCNCP24863 283 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 CCND3P30281 292 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 MPP1Q00013 466 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 GNA12Q03113 381 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 MAD2L1Q13257 205 aaPredicted RBP12.38□□□□□ -0.43
PTPRK-203ENST00000368207 SEMA5AQ13591 1074 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 HFE2Q6ZVN8 426 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 COPS8Q99627 209 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 SLC4A5Q9BY07 1137 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 ZFP14Q9HCL3 533 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 PIGVQ9NUD9 493 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 SCN3BQ9NY72 215 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 FBXO10Q9UK96 956 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 PLLPQ9Y342 182 aa12.38□□□□□ -0.43
PTPRK-203ENST00000368207 C2orf71A6NGG8 1288 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 UGT2B4P06133 528 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 ACRP10323 421 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 TLE2Q04725 743 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 CYP1B1Q16678 543 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 GRAMD4Q6IC98 578 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 ESRP1Q6NXG1 681 aaKnown RBP12.37□□□□□ -0.43
PTPRK-203ENST00000368207 CMASQ8NFW8 434 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-203ENST00000368207 MYOCQ99972 504 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 LIMD1Q9UGP4 676 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 RAI2Q9Y5P3 530 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 MAGEA13PA6NCF6 341 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 NRP1O14786 923 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 S100A3P33764 101 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 GPR1P46091 355 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 HSPA13P48723 471 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 NCALDP61601 193 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 POU5F1Q01860 360 aaKnown RBP12.37□□□□□ -0.43
PTPRK-203ENST00000368207 MAP3K10Q02779 954 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 CCDC157Q569K6 752 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 ZNF621Q6ZSS3 439 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 TMEM110Q86TL2 294 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 PACS2Q86VP3 889 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 AZIN2Q96A70 460 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 BORCS6Q96GS4 357 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 RNF145Q96MT1 663 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 SLC9A7Q96T83 725 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 CERS4Q9HA82 394 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 A0A0U1RQF3 1178 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-203ENST00000368207 BIRC5O15392 142 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 HGFP14210 728 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 GRM3Q14832 879 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 CHPFQ8IZ52 775 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 B4GALNT2Q8NHY0 566 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 LMO3Q8TAP4 145 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 SLC35B2Q8TB61 432 aa12.37□□□□□ -0.43
PTPRK-203ENST00000368207 STN1Q9H668 368 aaKnown RBP12.37□□□□□ -0.43
PTPRK-203ENST00000368207 WDR55Q9H6Y2 383 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-203ENST00000368207 KIAA1522Q9P206 1035 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-203ENST00000368207 ZFP37Q9Y6Q3 630 aaPredicted RBP12.37□□□□□ -0.43
PTPRK-203ENST00000368207 SPACA6W5XKT8 324 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms