RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 OXCT2Q9BYC2 517 aaPredicted RBP16.62■□□□□ 0.25
SCAF8-201ENST00000367178 RAD21L1Q9H4I0 556 aa16.62■□□□□ 0.25
SCAF8-201ENST00000367178 SLC12A4Q9UP95 1085 aa16.62■□□□□ 0.25
SCAF8-201ENST00000367178 SRRM3A6NNA2 597 aaPredicted RBP16.61■□□□□ 0.25
SCAF8-201ENST00000367178 E9PAM4 449 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 GUCA1AP43080 201 aaPredicted RBP16.61■□□□□ 0.25
SCAF8-201ENST00000367178 PTP4A2Q12974 167 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 HLA-DQA1Q5Y7H0 255 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 NPAS4Q8IUM7 802 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 LRRC57Q8N9N7 239 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 RERGLQ9H628 205 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 SLCO1B3Q9NPD5 702 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 AP3M1Q9Y2T2 418 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 LMO7Q8WWI1 1683 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.61■□□□□ 0.25
SCAF8-201ENST00000367178 TACR2P21452 398 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 SH3D19Q5HYK7 790 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 FOXR1Q6PIV2 292 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 GPRIN3Q6ZVF9 776 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 SLC51AQ86UW1 340 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 PPP3R2Q96LZ3 170 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 SALL4Q9UJQ4 1053 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 COQ4Q9Y3A0 265 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 CLOCKO15516 846 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 RGS5O15539 181 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 SGTAO43765 313 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 ATG7O95352 703 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 MPPE1Q53F39 396 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 OTOP3Q7RTS5 596 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 OR8D1Q8WZ84 308 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 LINGO1Q96FE5 620 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 TLE6Q9H808 572 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 ATAD3AQ9NVI7 634 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 IL1RAPL1Q9NZN1 696 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 ZNHIT2Q9UHR6 403 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 PSME2Q9UL46 239 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 BCLAF3A2AJT9 711 aaKnown RBP16.61■□□□□ 0.25
SCAF8-201ENST00000367178 CLTBP09497 229 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 NCF4Q15080 339 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 TCEA2Q15560 299 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 ZNF697Q5TEC3 545 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 CXorf40BQ96DE9 158 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 PRKAG3Q9UGI9 489 aa16.61■□□□□ 0.25
SCAF8-201ENST00000367178 AFDNP55196 1824 aaKnown RBP16.6■□□□□ 0.25
SCAF8-201ENST00000367178 ZW10O43264 779 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 SERPINI2O75830 405 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 LRIG2O94898 1065 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 SLC25A14O95258 325 aaPredicted RBP16.6■□□□□ 0.25
SCAF8-201ENST00000367178 NTRK1P04629 796 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 INHAP05111 366 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 ELFN1P0C7U0 828 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 VARS2Q5ST30 1063 aaKnown RBP16.6■□□□□ 0.25
SCAF8-201ENST00000367178 DBF4BQ8NFT6 615 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 SMAD5Q99717 465 aaKnown RBP16.6■□□□□ 0.25
SCAF8-201ENST00000367178 ARHGEF4Q9NR80 690 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 KLHL20Q9Y2M5 609 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 FAM47E-STBD1D6RA91 191 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 FGF19O95750 216 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 OTCP00480 354 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 SNRPB2P08579 225 aaKnown RBP16.6■□□□□ 0.25
SCAF8-201ENST00000367178 FAM58BPP0C7Q3 252 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 HGFP14210 728 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 ABRQ12979 859 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 SQLEQ14534 574 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 TXNDC11Q6PKC3 985 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 IQCKQ8N0W5 287 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 HIC2Q96JB3 615 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 PHACTR1Q9C0D0 580 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 TBC1D14Q9P2M4 693 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 C5orf60A6NFR6 353 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 KCNH1O95259 989 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 HNRNPLP14866 589 aaKnown RBP eCLIP16.6■□□□□ 0.251e-7■■■□□ 17.3
SCAF8-201ENST00000367178 L1CAMP32004 1257 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 HTR7P34969 479 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 MRPS15P82914 257 aaKnown RBP16.6■□□□□ 0.25
SCAF8-201ENST00000367178 FGD3Q5JSP0 725 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 RNF43Q68DV7 783 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 RFWD3Q6PCD5 774 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 SCIMPQ6UWF3 145 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 CAB39LQ9H9S4 337 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 ZFP14Q9HCL3 533 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 TRMT13Q9NUP7 481 aaKnown RBP16.6■□□□□ 0.25
SCAF8-201ENST00000367178 SNUPNO95149 360 aaKnown RBP16.6■□□□□ 0.25
SCAF8-201ENST00000367178 FGBP02675 491 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 MRPS22P82650 360 aaKnown RBP16.6■□□□□ 0.25
SCAF8-201ENST00000367178 TAC4Q86UU9 113 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 USP7Q93009 1102 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 FAXDC2Q96IV6 333 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 QKIQ96PU8 341 aaKnown RBP eCLIP16.6■□□□□ 0.251e-7■■■■■ 43.9
SCAF8-201ENST00000367178 SLC28A3Q9HAS3 691 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 BTRCQ9Y297 605 aa16.6■□□□□ 0.25
SCAF8-201ENST00000367178 GRM6O15303 877 aa16.59■□□□□ 0.25
SCAF8-201ENST00000367178 C2P06681 752 aa16.59■□□□□ 0.25
SCAF8-201ENST00000367178 WARSP23381 471 aaKnown RBP16.59■□□□□ 0.25
SCAF8-201ENST00000367178 LMO2P25791 158 aa16.59■□□□□ 0.25
SCAF8-201ENST00000367178 NTSP30990 170 aa16.59■□□□□ 0.25
SCAF8-201ENST00000367178 ALFQ53S48 1182 aa16.59■□□□□ 0.25
SCAF8-201ENST00000367178 CCDC185Q8N715 623 aa16.59■□□□□ 0.25
SCAF8-201ENST00000367178 CPT1BQ92523 772 aa16.59■□□□□ 0.25
SCAF8-201ENST00000367178 MFSD1Q9H3U5 465 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms