RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TSEN2Q8NCE0 465 aaKnown RBP13.56□□□□□ -0.24
LDB3-202ENST00000361373 PCED1BQ96HM7 432 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 AASDHPPTQ9NRN7 309 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 CORO2BQ9UQ03 480 aa13.56□□□□□ -0.24
LDB3-202ENST00000361373 UBXN8O00124 270 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 DCXO43602 365 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 SERPINB3P29508 390 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 PBX3P40426 434 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 PURAQ00577 322 aaKnown RBP13.55□□□□□ -0.24
LDB3-202ENST00000361373 PMF1Q6P1K2 205 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 PLD5Q8N7P1 536 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 CD101Q93033 1021 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 QKIQ96PU8 341 aaKnown RBP eCLIP13.55□□□□□ -0.24
LDB3-202ENST00000361373 ZFYVE1Q9HBF4 777 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 PEAK1Q9H792 1746 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 DAOAP59103 153 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 C1DQ13901 141 aaKnown RBP13.55□□□□□ -0.24
LDB3-202ENST00000361373 SQLEQ14534 574 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 TMEM26Q6ZUK4 368 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 MARK2Q7KZI7 788 aaKnown RBP13.55□□□□□ -0.24
LDB3-202ENST00000361373 GPR152Q8TDT2 470 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 ASZ1Q8WWH4 475 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 PROX1Q92786 737 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 ZDHHC4Q9NPG8 344 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 TMPRSS4Q9NRS4 437 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 SYBUQ9NX95 663 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 ZNHIT2Q9UHR6 403 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 KLHL20Q9Y2M5 609 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 KCPQ6ZWJ8 1503 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 HDAC3O15379 428 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 RPP40O75818 363 aaKnown RBP13.55□□□□□ -0.24
LDB3-202ENST00000361373 MC4RP32245 332 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 GABRB2P47870 512 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 PDK4Q16654 411 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 LIPMQ5VYY2 423 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 C16orf46Q6P387 395 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 ZNF621Q6ZSS3 439 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 GPRIN3Q6ZVF9 776 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 FIG4Q92562 907 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 GMLQ99445 158 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 CCDC167Q9P0B6 97 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 CCDC85CA6NKD9 419 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 SAC3D1A6NKF1 404 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 VGLL3A8MV65 326 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 BUD23O43709 281 aaKnown RBP13.55□□□□□ -0.24
LDB3-202ENST00000361373 AVILO75366 819 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 CCNDBP1O95273 360 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 POU1F1P28069 291 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 RPS7P62081 194 aaKnown RBP13.55□□□□□ -0.24
LDB3-202ENST00000361373 ZNHIT3Q15649 155 aaPredicted RBP13.55□□□□□ -0.24
LDB3-202ENST00000361373 RBM23Q86U06 439 aaKnown RBP13.55□□□□□ -0.24
LDB3-202ENST00000361373 ECHDC2Q86YB7 292 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 SETD9Q8NE22 299 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 SPATA5L1Q9BVQ7 753 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 SLC25A51Q9H1U9 297 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 CORO1CQ9ULV4 474 aaPredicted RBP13.55□□□□□ -0.24
LDB3-202ENST00000361373 MRPS17Q9Y2R5 130 aaKnown RBP13.55□□□□□ -0.24
LDB3-202ENST00000361373 KCNH1O95259 989 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 OR4Q2P0C623 313 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 GNA12Q03113 381 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 PACS1Q6VY07 963 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 KIAA0408Q6ZU52 694 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 TBC1D23Q9NUY8 699 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 GPSM3Q9Y4H4 160 aa13.55□□□□□ -0.24
LDB3-202ENST00000361373 TCRBV9S1A1TA0A576 114 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 KCNU1A8MYU2 1149 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 TRAFD1O14545 582 aaPredicted RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 INPP4BO15327 924 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 MSI1O43347 362 aaKnown RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 ABCB1P08183 1280 aaPredicted RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 SMYD5Q6GMV2 418 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 ZCCHC23Q6ZST2 131 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 R3HCC1LQ7Z5L2 792 aaKnown RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 STYXQ8WUJ0 223 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 CLP1Q92989 425 aaKnown RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 EXOC2Q96KP1 924 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 LEF1Q9UJU2 399 aaPredicted RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 ERVW-1Q9UQF0 538 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 ABHD14A-ACY1A0A1B0GW23 586 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 SCAMP3O14828 347 aaKnown RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 HS6ST1O60243 411 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 HOXB6P17509 224 aaKnown RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 CDKN2BP42772 138 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 GRB14Q14449 540 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 ZNF232Q9UNY5 417 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 INVSQ9Y283 1065 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 REXO2Q9Y3B8 237 aaKnown RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 MRPL42Q9Y6G3 142 aaKnown RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 RGS1Q08116 209 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 HNRNPDQ14103 355 aaKnown RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 TRPC4APQ8TEL6 797 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 TMEM175Q9BSA9 504 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 IKZF4Q9H2S9 585 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 BPIFA1Q9NP55 256 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 LIMD1Q9UGP4 676 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 ZNF229Q9UJW7 825 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 AFDNP55196 1824 aaKnown RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 CCDC189A1A4V9 331 aa13.54□□□□□ -0.24
LDB3-202ENST00000361373 DDX3YO15523 660 aaKnown RBP13.54□□□□□ -0.24
LDB3-202ENST00000361373 GRIA4P48058 902 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms