RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 UNC93AQ86WB7 457 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 SLC44A2Q8IWA5 706 aaPredicted RBP14.04□□□□□ -0.16
SMC5-201ENST00000361138 CYP4Z2PQ8N1L4 340 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 LPCAT1Q8NF37 534 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 FAR1Q8WVX9 515 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 CPXM1Q96SM3 734 aa14.04□□□□□ -0.16
SMC5-201ENST00000361138 ITM2AO43736 263 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 SLC22A3O75751 556 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 SLC11A2P49281 568 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 CDK18Q07002 472 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 VEPH1Q14D04 833 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 PRAMEF18Q5VWM3 479 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 GLT6D1Q7Z4J2 308 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 FAM156AQ8NDB6 213 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 IL31RAQ8NI17 732 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 C7orf43Q8WVR3 580 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 RPS6KA6Q9UK32 745 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.03□□□□□ -0.16
SMC5-201ENST00000361138 NFASCO94856 1347 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 UGT1A9O60656 530 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 USP17L7P0C7H9 530 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 BLVRAP53004 296 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 LIMK2P53671 638 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 GPX6P59796 221 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 SPRED3Q2MJR0 410 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 CERCAMQ5T4B2 595 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 GCNT7Q6ZNI0 430 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 SPATA19Q7Z5L4 167 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 TFAP2DQ7Z6R9 452 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 MINDY2Q8NBR6 621 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 ZNF512Q96ME7 567 aaPredicted RBP14.03□□□□□ -0.16
SMC5-201ENST00000361138 PRRG3Q9BZD7 231 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 UGT1A7Q9HAW7 530 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 UGT1A10Q9HAW8 530 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 UGT1A8Q9HAW9 530 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 RAPGEFL1Q9UHV5 662 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 FARP1Q9Y4F1 1045 aaPredicted RBP14.03□□□□□ -0.16
SMC5-201ENST00000361138 ABCB1P08183 1280 aaPredicted RBP14.03□□□□□ -0.16
SMC5-201ENST00000361138 CSH1P0DML2 217 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 CSH2P0DML3 217 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 AOC1P19801 751 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 SLC16A1P53985 500 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 CAPSQ13938 189 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 LEMD2Q8NC56 503 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 ST13P5Q8NFI4 369 aaPredicted RBP14.03□□□□□ -0.16
SMC5-201ENST00000361138 SMARCD1Q96GM5 515 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 MTFR1LQ9H019 292 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 OR12D3Q9UGF7 316 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 MOSPD1Q9UJG1 213 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 LTN1O94822 1766 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 THRBP10828 461 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 HIPK1Q86Z02 1210 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 OFCC1Q8IZS5 231 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 SHISA4Q96DD7 197 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 MTFMTQ96DP5 389 aaKnown RBP14.03□□□□□ -0.16
SMC5-201ENST00000361138 SMAD5Q99717 465 aaKnown RBP14.03□□□□□ -0.16
SMC5-201ENST00000361138 MOV10Q9HCE1 1003 aaKnown RBP14.03□□□□□ -0.16
SMC5-201ENST00000361138 HACL1Q9UJ83 578 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 TNPO3Q9Y5L0 923 aaKnown RBP14.03□□□□□ -0.16
SMC5-201ENST00000361138 E7ENX8 843 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 TMEM63AO94886 807 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 SERPINF2P08697 491 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 UMPSP11172 480 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 CYP4B1P13584 511 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 MYL12AP19105 171 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 CDK9P50750 372 aaKnown RBP14.03□□□□□ -0.16
SMC5-201ENST00000361138 OAZ1P54368 228 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 CDC42P60953 191 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 TRAPPC12Q8WVT3 735 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 ROPN1LQ96C74 230 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 ST6GALNAC4Q9H4F1 302 aa14.03□□□□□ -0.16
SMC5-201ENST00000361138 SAGE2PA6NJ88 616 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 TGFB3P10600 412 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 DPEP1P16444 411 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 ITGB6P18564 788 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 EFEMP1Q12805 493 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 MOGSQ13724 837 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 ZBED5Q49AG3 693 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 PYDC2Q56P42 97 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 SH3D19Q5HYK7 790 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 ASRGL1Q7L266 308 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 KCTD15Q96SI1 283 aaPredicted RBP14.02□□□□□ -0.16
SMC5-201ENST00000361138 PCDH12Q9NPG4 1184 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 FAM50BQ9Y247 325 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 BTN3A3O00478 584 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 ZFP69Q49AA0 526 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 MFSD4BQ5TF39 518 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 SLC26A9Q7LBE3 791 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 HDDC2Q7Z4H3 204 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 MIB1Q86YT6 1006 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 UNC5BQ8IZJ1 945 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 RAB2BQ8WUD1 216 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 RBM4BQ9BQ04 359 aaKnown RBP14.02□□□□□ -0.16
SMC5-201ENST00000361138 RBM4Q9BWF3 364 aaKnown RBP14.02□□□□□ -0.16
SMC5-201ENST00000361138 MYH8P13535 1937 aa14.02□□□□□ -0.16
SMC5-201ENST00000361138 TCRBV7S3A2A0A539 114 aa14.02□□□□□ -0.17
SMC5-201ENST00000361138 PRR23AA6NEV1 266 aa14.02□□□□□ -0.17
SMC5-201ENST00000361138 STAU1O95793 577 aaKnown RBP14.02□□□□□ -0.17
SMC5-201ENST00000361138 GPIP06744 558 aa14.02□□□□□ -0.17
SMC5-201ENST00000361138 MAPKAPK3Q16644 382 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms