RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 GRIA2P42262 883 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 DAOAP59103 153 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 HTRA4P83105 476 aaPredicted RBP12.53□□□□□ -0.4
UBA3-202ENST00000361055 ZBTB17Q13105 803 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 ADGRE1Q14246 886 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 TLR1Q15399 786 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 UGP2Q16851 508 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 RARS2Q5T160 578 aaKnown RBP12.53□□□□□ -0.4
UBA3-202ENST00000361055 FBXL19Q6PCT2 694 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 METTL23Q86XA0 190 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 TICAM1Q8IUC6 712 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 TSGA13Q96PP4 275 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 ANLNQ9NQW6 1124 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 CNGB3Q9NQW8 809 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 CDYLQ9Y232 598 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 ACOT9Q9Y305 439 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 VWA8A3KMH1 1905 aa12.53□□□□□ -0.4
UBA3-202ENST00000361055 MYO18AQ92614 2054 aaKnown RBP12.52□□□□□ -0.4
UBA3-202ENST00000361055 I6L893 689 aaPredicted RBP12.52□□□□□ -0.4
UBA3-202ENST00000361055 BCAS2O75934 225 aaPredicted RBP12.52□□□□□ -0.4
UBA3-202ENST00000361055 AHSGP02765 367 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 FAM200BP0CF97 657 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 CD1EP15812 388 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 TYMPP19971 482 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 ABCG1P45844 678 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 RPL5P46777 297 aaKnown RBP12.52□□□□□ -0.4
UBA3-202ENST00000361055 THOP1P52888 689 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 NSUN2Q08J23 767 aaKnown RBP eCLIP12.52□□□□□ -0.4
UBA3-202ENST00000361055 FLOT2Q14254 428 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 PCID2Q5JVF3 399 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 SPOUT1Q5T280 376 aaKnown RBP12.52□□□□□ -0.4
UBA3-202ENST00000361055 PKN3Q6P5Z2 889 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 LSMEM2Q8N112 164 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 NPWQ8N729 165 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 AGR3Q8TD06 166 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 SCYL1Q96KG9 808 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 ZBED2Q9BTP6 218 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 MED10Q9BTT4 135 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 ULBP1Q9BZM6 244 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 ZBTB26Q9HCK0 441 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 MRGBPQ9NV56 204 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 MARCH5Q9NX47 278 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 ETAA1Q9NY74 926 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 PLK2Q9NYY3 685 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 INSL6Q9Y581 213 aa12.52□□□□□ -0.4
UBA3-202ENST00000361055 TIMM13Q9Y5L4 95 aaPredicted RBP12.52□□□□□ -0.4
UBA3-202ENST00000361055 YJEFN3A6XGL0 299 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 NT5C1B-RDH14C9J2C7 533 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 DLX3O60479 287 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 NPHS1O60500 1241 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 JCHAINP01591 159 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 SLC35E2BP0CK96 405 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 XRCC1P18887 633 aaPredicted RBP12.52□□□□□ -0.41
UBA3-202ENST00000361055 HSPA13P48723 471 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 MAP3K7CLP57077 242 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 COG7P83436 770 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 ELAVL2Q12926 359 aaKnown RBP12.52□□□□□ -0.41
UBA3-202ENST00000361055 ART3Q13508 389 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 CEACAM7Q14002 265 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 RAB41Q5JT25 222 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 PPM1LQ5SGD2 360 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 HERC6Q8IVU3 1022 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 CNTN4Q8IWV2 1026 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 FSTL5Q8N475 847 aaPredicted RBP12.52□□□□□ -0.41
UBA3-202ENST00000361055 RCN3Q96D15 328 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 DTNBP1Q96EV8 351 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 EPAS1Q99814 870 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 NUF2Q9BZD4 464 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 WDR41Q9HAD4 459 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 UTP6Q9NYH9 597 aaKnown RBP12.52□□□□□ -0.41
UBA3-202ENST00000361055 RIMS3Q9UJD0 308 aa12.52□□□□□ -0.41
UBA3-202ENST00000361055 AAR2Q9Y312 384 aaKnown RBP12.52□□□□□ -0.41
UBA3-202ENST00000361055 C15orf38-AP3S2A0A0A6YYH1 394 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 KLHL33A6NCF5 533 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 TRPC5OSA6NMA1 111 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 TK2O00142 265 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 NEMP1O14524 444 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 SYN3O14994 580 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 AP1G2O75843 785 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 SRGAP2BP0DMP2 458 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 LAG3P18627 525 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 GABRB3P28472 473 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 PBX3P40426 434 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 CXCR3P49682 368 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 MS4A2Q01362 244 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 CNGA3Q16281 694 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 SH2D4BQ5SQS7 431 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 PM20D1Q6GTS8 502 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 FUT10Q6P4F1 479 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 ARPINQ7Z6K5 226 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 CCDC117Q8IWD4 279 aaPredicted RBP12.51□□□□□ -0.41
UBA3-202ENST00000361055 KDM1BQ8NB78 822 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 MAELQ96JY0 434 aaKnown RBP12.51□□□□□ -0.41
UBA3-202ENST00000361055 ZNF558Q96NG5 402 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 GPR78Q96P69 363 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 RAD9AQ99638 391 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 APOL2Q9BQE5 337 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 WDCPQ9H6R7 721 aa12.51□□□□□ -0.41
UBA3-202ENST00000361055 MRPL40Q9NQ50 206 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms