RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 RNF157Q96PX1 679 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 VPS35Q96QK1 796 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 CPNE1Q99829 537 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 KIFC3Q9BVG8 833 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 SOX17Q9H6I2 414 aaPredicted RBP13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 NPAP1Q9NZP6 1156 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 ZNF639Q9UID6 485 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 BAG5Q9UL15 447 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 DDHD2O94830 711 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 GABARAPO95166 117 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 MLNP12872 115 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 POLR2CP19387 275 aaPredicted RBP13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 TGM2P21980 687 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 CCR10P46092 362 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 CDH6P55285 790 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 ZNF181Q2M3W8 571 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 PMF1Q6P1K2 205 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 TTLL6Q8N841 843 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 TRPV3Q8NET8 790 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 BEST2Q8NFU1 509 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 ZNF560Q96MR9 790 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 COQ7Q99807 217 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 NECTIN3Q9NQS3 549 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 ZNF221Q9UK13 617 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 PMF1-BGLAPU3KQ54 211 aa13.4□□□□□ -0.26
SPTSSB-201ENST00000359175 TRPC5OSA6NMA1 111 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 M0R3G1 203 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 BBOX1O75936 387 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 PTTG1O95997 202 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 APOA4P06727 396 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 GRK3P35626 688 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 SLC7A2P52569 658 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 GALNT1Q10472 559 aaPredicted RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 SQLEQ14534 574 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 SNAP47Q5SQN1 464 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 FAM102BQ5T8I3 360 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 PEX13Q92968 403 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 MOCOSQ96EN8 888 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 UBXN10Q96LJ8 280 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 C2orf49Q9BVC5 232 aaPredicted RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 RPAP3Q9H6T3 665 aaPredicted RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 INTS10Q9NVR2 710 aaKnown RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 NYAP2Q9P242 653 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 TTC24A2A3L6 582 aaPredicted RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 ERVH48-1M5A8F1 160 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 SDHDO14521 159 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 MRASO14807 208 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 RAD51BO15315 384 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 EXTL3O43909 919 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 XYLBO75191 536 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 PGAM1P18669 254 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 PKLRP30613 574 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 GABARAPL2P60520 117 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 EIF2B5Q13144 721 aaKnown RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 DMP1Q13316 513 aaPredicted RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 TJAP1Q5JTD0 557 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 LCN8Q6JVE9 175 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 ZYG11AQ6WRX3 759 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 R3HCC1LQ7Z5L2 792 aaKnown RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 ADGRG5Q8IZF4 528 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 NTPCRQ9BSD7 190 aaKnown RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 SLCO3A1Q9UIG8 710 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 PTPRJQ12913 1337 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 A0A096LPK6 155 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 CCDC78A2IDD5 438 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 H0Y858 1186 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 AP3B1O00203 1094 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 POLR1CO15160 346 aaPredicted RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 DLGAP3O95886 979 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 SNRPB2P08579 225 aaKnown RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 YWHABP31946 246 aaKnown RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 WNT7BP56706 349 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 SEMA5AQ13591 1074 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 FASTKQ14296 549 aaKnown RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 POU6F1Q14863 301 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 DUSP7Q16829 419 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 ZBTB41Q5SVQ8 909 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 NEK5Q6P3R8 708 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 CASC4Q6P4E1 433 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 ADCK1Q86TW2 530 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 SPPL2CQ8IUH8 684 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 CCDC28AQ8IWP9 274 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 PSMA8Q8TAA3 256 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 HDAC2Q92769 488 aaKnown RBP13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 DACH2Q96NX9 599 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 RBBP8Q99708 897 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 SLC25A23Q9BV35 468 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 BTBD2Q9BX70 525 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 ING2Q9H160 280 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 SPC25Q9HBM1 224 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 KMT5AQ9NQR1 393 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 TLR9Q9NR96 1032 aa13.39□□□□□ -0.27
SPTSSB-201ENST00000359175 TPST1O60507 370 aa13.38□□□□□ -0.27
SPTSSB-201ENST00000359175 ALBP02768 609 aa13.38□□□□□ -0.27
SPTSSB-201ENST00000359175 RFC2P35250 354 aa13.38□□□□□ -0.27
SPTSSB-201ENST00000359175 PTPN20Q4JDL3 420 aa13.38□□□□□ -0.27
SPTSSB-201ENST00000359175 IDO2Q6ZQW0 420 aa13.38□□□□□ -0.27
SPTSSB-201ENST00000359175 C15orf52Q6ZUT6 534 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms