RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 KLHL32Q96NJ5 620 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 MRPL1Q9BYD6 325 aaKnown RBP8.66□□□□□ -1.02
RFX3-202ENST00000358730 AGO3Q9H9G7 860 aaKnown RBP8.66□□□□□ -1.02
RFX3-202ENST00000358730 TRPC7Q9HCX4 862 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 TBC1D30Q9Y2I9 924 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 HS3ST4Q9Y661 456 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 TLL2Q9Y6L7 1015 aa8.66□□□□□ -1.02
RFX3-202ENST00000358730 HEATR9A2RTY3 570 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 IPO13O94829 963 aaKnown RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 SNUPNO95149 360 aaKnown RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 PGM3O95394 542 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 CYP11A1P05108 521 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 PABPC4LP0CB38 370 aaKnown RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 CCDC166P0CW27 439 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 HSPA1AP0DMV8 641 aaKnown RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 HSPA1BP0DMV9 641 aaKnown RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 CLCN5P51795 746 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 MAXP61244 160 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 PDAP1Q13442 181 aaKnown RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 RBBP5Q15291 538 aaKnown RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 MAPRE1Q15691 268 aaKnown RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 GDF6Q6KF10 455 aaPredicted RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 CXCL17Q6UXB2 119 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 KIAA0408Q6ZU52 694 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 TFAP2DQ7Z6R9 452 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 CUZD1Q86UP6 607 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 SATL1Q86VE3 508 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 SPATA2LQ8IUW3 424 aaPredicted RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 MARVELD2Q8N4S9 558 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 PCDH20Q8N6Y1 951 aaKnown RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 PNPLA1Q8N8W4 532 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 CALML6Q8TD86 181 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 PHF21BQ96EK2 531 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 CNBD2Q96M20 576 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 PKP2Q99959 881 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 NT5MQ9NPB1 228 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 EPS15L1Q9UBC2 864 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 DSEQ9UL01 958 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 AP4B1Q9Y6B7 739 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 PRSS51A0A1B0GVH4 220 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 TRIM38O00635 465 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 DNAJA2O60884 412 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 CRTAMO95727 393 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 ITGB1P05556 798 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 LTA4HP09960 611 aaKnown RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 C1QTNF8P60827 252 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 PSME3P61289 254 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 PFKPQ01813 784 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 FASTKQ14296 549 aaKnown RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 PPP1R3AQ16821 1122 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 KDELC1Q6UW63 502 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 SCD5Q86SK9 330 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 TMEM126BQ8IUX1 230 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 SCN4BQ8IWT1 228 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 THEM5Q8N1Q8 247 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 GABPB2Q8TAK5 448 aaPredicted RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 RSPH1Q8WYR4 309 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 CCDC126Q96EE4 140 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 FAR2Q96K12 515 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 NMUR1Q9HB89 426 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 EML4Q9HC35 981 aaKnown RBP8.65□□□□□ -1.02
RFX3-202ENST00000358730 SPON1Q9HCB6 807 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 TNFRSF12AQ9NP84 129 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 CCDC167Q9P0B6 97 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 RAB26Q9ULW5 256 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 Q9Y3F1 56 aa8.65□□□□□ -1.02
RFX3-202ENST00000358730 SCN10AQ9Y5Y9 1956 aa8.65□□□□□ -1.03
RFX3-202ENST00000358730 A0A1W2PQH9 124 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 GLTPD2A6NH11 291 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 F8W810 466 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 ACOT8O14734 319 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 GPR182O15218 404 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 DENRO43583 198 aaKnown RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 SMIM18P0DKX4 95 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 CD52P31358 61 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 CD86P42081 329 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 SERPINH1P50454 418 aaKnown RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 CACNB2Q08289 660 aaPredicted RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 SQLEQ14534 574 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 MAPRE2Q15555 327 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 GNASQ5JWF2 1037 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 ARTNQ5T4W7 220 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 AFMIDQ63HM1 303 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 AP1ARQ63HQ0 302 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 REP15Q6BDI9 236 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 PTAR1Q7Z6K3 402 aaPredicted RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 ZNF354CQ86Y25 554 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 GALNT4Q8N4A0 578 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 SNX31Q8N9S9 440 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 ADCY4Q8NFM4 1077 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 SPPL2BQ8TCT7 592 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 PABPC5Q96DU9 382 aaKnown RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 ASB9Q96DX5 294 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 TSPAN17Q96FV3 270 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 SERPINB11Q96P15 392 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 KLHL5Q96PQ7 755 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 SLC25A51Q9H1U9 297 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 M0QZQ0 153 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms