RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 SLC14A2Q15849 920 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 LRRC73Q5JTD7 316 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 TMEM31Q5JXX7 168 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 CFAP58Q5T655 872 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 ARMC12Q5T9G4 340 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 KCTD11Q693B1 232 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 C4orf22Q6V702 233 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 SYDE1Q6ZW31 735 aaPredicted RBP14.99□□□□□ -0.01
CCNE1-202ENST00000357943 MMGT1Q8N4V1 131 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 PPP1R16AQ96I34 528 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 TRIB3Q96RU7 358 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 LRRC1Q9BTT6 524 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 PABPC3Q9H361 631 aaKnown RBP14.99□□□□□ -0.01
CCNE1-202ENST00000357943 DYRK4Q9NR20 520 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 FBXL12Q9NXK8 326 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 ASIC3Q9UHC3 531 aa14.99□□□□□ -0.01
CCNE1-202ENST00000357943 CUL9Q8IWT3 2517 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.98□□□□□ -0.01
CCNE1-202ENST00000357943 TSPAN11A1L157 253 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 USP12O75317 370 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 RNASEH2AO75792 299 aaKnown RBP14.98□□□□□ -0.01
CCNE1-202ENST00000357943 APRTP07741 180 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 TDGF1P13385 188 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 IVDP26440 423 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 P2RY2P41231 377 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 TPMTP51580 245 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 GALNT3Q14435 633 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 UGP2Q16851 508 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 TTC31Q49AM3 519 aaPredicted RBP14.98□□□□□ -0.01
CCNE1-202ENST00000357943 BRAT1Q6PJG6 821 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 ERN2Q76MJ5 926 aaKnown RBP14.98□□□□□ -0.01
CCNE1-202ENST00000357943 PAF1Q8N7H5 531 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 PIH1D2Q8WWB5 315 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 IFT43Q96FT9 208 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 PPP1R2P1Q96PQ5 205 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 SMIM14Q96QK8 99 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 APOL2Q9BQE5 337 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 NEUROG2Q9H2A3 272 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 DKK3Q9UBP4 350 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 SCML1Q9UN30 329 aa14.98□□□□□ -0.01
CCNE1-202ENST00000357943 LOC285095A0A1B0GVY8 99 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 TCRBV7S3A2A0A539 114 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 AP2A1O95782 977 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 AGTP01019 485 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 PRKCGP05129 697 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 ADRB3P13945 408 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 TIMP2P16035 220 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 ITIH2P19823 946 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 CA4P22748 312 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 ADRA1AP35348 466 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 ADCY8P40145 1251 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 ABL2P42684 1182 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 CHRNA4P43681 627 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 NEK3P51956 506 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 SLC7A5Q01650 507 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 CSTF1Q05048 431 aaKnown RBP14.97□□□□□ -0.01
CCNE1-202ENST00000357943 PTPRRQ15256 657 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 PIP5KL1Q5T9C9 394 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 AGBL4Q5VU57 503 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 C8orf74Q6P047 294 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 FBXL19Q6PCT2 694 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.97□□□□□ -0.01
CCNE1-202ENST00000357943 TTC7BQ86TV6 843 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 LPCAT1Q8NF37 534 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 CCHCR1Q8TD31 782 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 HCAR2Q8TDS4 363 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 GANCQ8TET4 914 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 RLN3Q8WXF3 142 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 CPT1BQ92523 772 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 SPOCK2Q92563 424 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 OMDQ99983 421 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 HINFPQ9BQA5 517 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 FICDQ9BVA6 458 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 C1QTNF1Q9BXJ1 281 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 FSD1LQ9BXM9 530 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 HDAC8Q9BY41 377 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 TRIM31Q9BZY9 425 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 ITM2CQ9NQX7 267 aa14.97□□□□□ -0.01
CCNE1-202ENST00000357943 USP36Q9P275 1121 aaKnown RBP14.97□□□□□ -0.01
CCNE1-202ENST00000357943 ARIH1Q9Y4X5 557 aaPredicted RBP14.97□□□□□ -0.01
CCNE1-202ENST00000357943 GOLGA6CA6NDK9 693 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 GOLGA6BA6NDN3 693 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 FAM187AA6NFU0 413 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 E7EVH7 732 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 AXIN1O15169 862 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 CPP00450 1065 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 ATXN1LP0C7T5 689 aaKnown RBP14.96□□□□□ -0.01
CCNE1-202ENST00000357943 GOLGA6DP0CG33 693 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 GRIA1P42261 906 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 LMAN1P49257 510 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 SEMG2Q02383 582 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 ANKRD22Q5VYY1 191 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 RANBP10Q6VN20 620 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 FAM124AQ86V42 546 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 SLC25A41Q8N5S1 370 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 FRMD1Q8N878 549 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 FAM131CQ96AQ9 280 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 FEM1CQ96JP0 617 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 ERP44Q9BS26 406 aa14.96□□□□□ -0.01
CCNE1-202ENST00000357943 GOLGA6AQ9NYA3 693 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms