RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GLOD4Q9HC38 313 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 GALNT8Q9NY28 637 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 CROTQ9UKG9 612 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 MAGED2Q9UNF1 606 aaPredicted RBP17.85■□□□□ 0.45
RTN4-204ENST00000357732 SLC8A2Q9UPR5 921 aa17.85■□□□□ 0.45
RTN4-204ENST00000357732 MBLAC1A4D2B0 266 aaPredicted RBP17.84■□□□□ 0.45
RTN4-204ENST00000357732 SRP72O76094 671 aaKnown RBP17.84■□□□□ 0.45
RTN4-204ENST00000357732 BMP10O95393 424 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 SNAI1O95863 264 aaPredicted RBP17.84■□□□□ 0.45
RTN4-204ENST00000357732 CPB1P15086 417 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 SMPD1P17405 629 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 TCN1P20061 433 aaPredicted RBP17.84■□□□□ 0.45
RTN4-204ENST00000357732 ADRA1AP35348 466 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 RANBP1P43487 201 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 CLCN5P51795 746 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 TAS2R39P59534 338 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 DENND5AQ6IQ26 1287 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 PPP4R4Q6NUP7 873 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 CNSTQ6PJW8 725 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 BEND5Q7L4P6 421 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 FAM35AQ86V20 835 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 HERC6Q8IVU3 1022 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 DENND6AQ8IWF6 608 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 ZUFSPQ96AP4 578 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 RMND5BQ96G75 393 aaPredicted RBP17.84■□□□□ 0.45
RTN4-204ENST00000357732 TRPV6Q9H1D0 765 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 IGSF5Q9NSI5 407 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 UBP1Q9NZI7 540 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 PIN4Q9Y237 131 aaKnown RBP17.84■□□□□ 0.45
RTN4-204ENST00000357732 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.84■□□□□ 0.45
RTN4-204ENST00000357732 TMEM233B4DJY2 109 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 NRP2O60462 931 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 GPC4O75487 556 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 TRPA1O75762 1119 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 CTBP1Q13363 440 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 KCTD21Q4G0X4 260 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 PRMT9Q6P2P2 845 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 CROCCP3Q8IVE0 287 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 ATPAF2Q8N5M1 289 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 PCYOX1LQ8NBM8 494 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 HMGCLL1Q8TB92 370 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 DIS3LQ8TF46 1054 aaKnown RBP17.84■□□□□ 0.45
RTN4-204ENST00000357732 GAB3Q8WWW8 586 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 LRTOMTQ8WZ04 291 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 TRIM15Q9C019 465 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 VPS45Q9NRW7 570 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 FBXO5Q9UKT4 447 aa17.84■□□□□ 0.45
RTN4-204ENST00000357732 FBP2O00757 339 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 MRASO14807 208 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 FGF10O15520 208 aaPredicted RBP17.83■□□□□ 0.45
RTN4-204ENST00000357732 MYL3P08590 195 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 LTA4HP09960 611 aaKnown RBP17.83■□□□□ 0.45
RTN4-204ENST00000357732 C7P10643 843 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 POU6F1Q14863 301 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 ACAP2Q15057 778 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 AGKQ53H12 422 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 WSCD1Q658N2 575 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 TIGD7Q6NT04 549 aaPredicted RBP17.83■□□□□ 0.45
RTN4-204ENST00000357732 ESRP1Q6NXG1 681 aaKnown RBP17.83■□□□□ 0.45
RTN4-204ENST00000357732 DHRS4L2Q6PKH6 230 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 OTOP3Q7RTS5 596 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 CUZD1Q86UP6 607 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 LRRC49Q8IUZ0 686 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 PCDH20Q8N6Y1 951 aaKnown RBP17.83■□□□□ 0.45
RTN4-204ENST00000357732 MFSD2AQ8NA29 543 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 GPRC5AQ8NFJ5 357 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 SMOQ99835 787 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 TMEM79Q9BSE2 394 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 CLK4Q9HAZ1 481 aaKnown RBP17.83■□□□□ 0.45
RTN4-204ENST00000357732 PREBQ9HCU5 417 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 SHROOM3Q8TF72 1996 aa17.83■□□□□ 0.45
RTN4-204ENST00000357732 PRORSD1PA6NEY8 169 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 TRIM64CA6NLI5 447 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 MATN3O15232 486 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 NRF1Q16656 503 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 UBXN11Q5T124 520 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 INTS11Q5TA45 600 aaKnown RBP17.83■□□□□ 0.44
RTN4-204ENST00000357732 ZNF470Q6ECI4 717 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 PAOXQ6QHF9 649 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 DHFR2Q86XF0 187 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 OR6J1Q8NGC5 347 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 SLCO4A1Q96BD0 722 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 DNAJC1Q96KC8 554 aaKnown RBP17.83■□□□□ 0.44
RTN4-204ENST00000357732 ASB2Q96Q27 587 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 OMDQ99983 421 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 CRTAC1Q9NQ79 661 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 ACSS2Q9NR19 701 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 DDX18Q9NVP1 670 aaKnown RBP17.83■□□□□ 0.44
RTN4-204ENST00000357732 MTF2Q9Y483 593 aaPredicted RBP17.83■□□□□ 0.44
RTN4-204ENST00000357732 SNX13Q9Y5W8 968 aa17.83■□□□□ 0.44
RTN4-204ENST00000357732 A8MT66 165 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 H3BSA7 217 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 HNRNPRO43390 633 aaKnown RBP17.82■□□□□ 0.44
RTN4-204ENST00000357732 HOXC13P31276 330 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 ZNF460Q14592 562 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 C6orf10Q5SRN2 563 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 FAM156AQ8NDB6 213 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 TNIP2Q8NFZ5 429 aa17.82■□□□□ 0.44
RTN4-204ENST00000357732 OR2T34Q8NGX1 318 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms