RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PSMA2P25787 234 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 RBMS1P29558 406 aaKnown RBP10.77□□□□□ -0.69
CAPN3-204ENST00000356316 LSSP48449 732 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 PEX5P50542 639 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 POLR2LP62875 67 aaKnown RBP10.77□□□□□ -0.69
CAPN3-204ENST00000356316 GABREP78334 506 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 CCDC173Q0VFZ6 552 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 EIF2B5Q13144 721 aaKnown RBP10.77□□□□□ -0.69
CAPN3-204ENST00000356316 C1orf61Q13536 156 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 LRRC14Q15048 493 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 ELOCQ15369 112 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 CYTH1Q15438 398 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 UGP2Q16851 508 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 TBC1D25Q3MII6 688 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 CCDC183Q5T5S1 534 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 ERMARDQ5T6L9 678 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 BROXQ5VW32 411 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 CDCP2Q5VXM1 449 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 PHACTR4Q8IZ21 702 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 NETO2Q8NC67 525 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 ZNF248Q8NDW4 579 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 ATL2Q8NHH9 583 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 GRAMD1AQ96CP6 724 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 EXOC2Q96KP1 924 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 ZNF578Q96N58 590 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-204ENST00000356316 ZNF641Q96N77 438 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-204ENST00000356316 LGMNQ99538 433 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 EIF3CQ99613 913 aaKnown RBP10.77□□□□□ -0.69
CAPN3-204ENST00000356316 KLC2Q9H0B6 622 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 DHX35Q9H5Z1 703 aaKnown RBP10.77□□□□□ -0.69
CAPN3-204ENST00000356316 NOL6Q9H6R4 1146 aaKnown RBP10.77□□□□□ -0.69
CAPN3-204ENST00000356316 KLF15Q9UIH9 416 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 MYO6Q9UM54 1294 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 NEU3Q9UQ49 428 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 PCDHB1Q9Y5F3 818 aa10.77□□□□□ -0.69
CAPN3-204ENST00000356316 CACNA1GO43497 2377 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 ZFYVE26Q68DK2 2539 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 TCRBV5S1A1TA0A578 114 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 EME2A4GXA9 379 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-204ENST00000356316 LMO7DNF2Z398 122 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 EEF2KO00418 725 aaKnown RBP10.76□□□□□ -0.69
CAPN3-204ENST00000356316 MUSKO15146 869 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 YY2O15391 372 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 INSIG1O15503 277 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 PRPSAP2O60256 369 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 ALPIP09923 528 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 ITIH2P19823 946 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 SERPINA4P29622 427 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 PAPOLAP51003 745 aaKnown RBP10.76□□□□□ -0.69
CAPN3-204ENST00000356316 PCBP4P57723 403 aaKnown RBP10.76□□□□□ -0.69
CAPN3-204ENST00000356316 MAMLD1Q13495 774 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 ASIC2Q16515 512 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 ISXQ2M1V0 245 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 TMEM52BQ4KMG9 183 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 BRAT1Q6PJG6 821 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 ENPP7Q6UWV6 458 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 MACC1Q6ZN28 852 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 GPR155Q7Z3F1 870 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 RD3Q7Z3Z2 195 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 IRF2BP2Q7Z5L9 587 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 HID1Q8IV36 788 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 RBFAQ8N0V3 343 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 AOPEPQ8N6M6 819 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 WDR48Q8TAF3 677 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 NAT6Q93015 286 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 CRELD1Q96HD1 420 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 TBATAQ96M53 351 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 FCRL3Q96P31 734 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-204ENST00000356316 TUBGCP5Q96RT8 1024 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 ATP13A3Q9H7F0 1226 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 CAAP1Q9H8G2 361 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 POLR1BQ9H9Y6 1135 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 MBNL1Q9NR56 388 aaKnown RBP10.76□□□□□ -0.69
CAPN3-204ENST00000356316 GULP1Q9UBP9 304 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 PCSK1NQ9UHG2 260 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 AP4E1Q9UPM8 1137 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 IGSF10Q6WRI0 2623 aa10.76□□□□□ -0.69
CAPN3-204ENST00000356316 J3KR12 359 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 DFFAO00273 331 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 PRAMEF11O60813 436 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 GCATO75600 419 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 RASGRP1O95267 797 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 PIGNO95427 931 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 TNFP01375 233 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 ATP1A3P13637 1013 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 TSHRP16473 764 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 TGM2P21980 687 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 IGFALSP35858 605 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 CSNK1DP48730 415 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 LIG3P49916 1009 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 ERVPABLB-1P60509 514 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 TYRO3Q06418 890 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 BCL2L1Q07817 233 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 INPP5AQ14642 412 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 RFTN1Q14699 578 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-204ENST00000356316 NCAPHQ15003 741 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 IRF4Q15306 451 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 PPP6R3Q5H9R7 873 aaPredicted RBP10.75□□□□□ -0.69
CAPN3-204ENST00000356316 TPRG1LQ5T0D9 272 aa10.75□□□□□ -0.69
CAPN3-204ENST00000356316 C6orf132Q5T0Z8 1188 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms