RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 FBXL22Q6P050 247 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 KYQ8NBH2 561 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 CD99L2Q8TCZ2 262 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 TADA1Q96BN2 335 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 MOCOSQ96EN8 888 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 VCXQ9H320 206 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 VCX3BQ9H321 246 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 EML4Q9HC35 981 aaKnown RBP22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 DNAH12Q6ZR08 3092 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 MROH6A6NGR9 719 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 MMP2P08253 660 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 LTA4HP09960 611 aaKnown RBP22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 SLC26A3P40879 764 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 CCR10P46092 362 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 YBEYP58557 167 aaPredicted RBP22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 DSG1Q02413 1049 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 POLD3Q15054 466 aaPredicted RBP22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 GSTA3Q16772 222 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 CAPRIN2Q6IMN6 1127 aaKnown RBP22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 ZNF280DQ6N043 979 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 TRAF7Q6Q0C0 670 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 TRIM67Q6ZTA4 783 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 ZNF354CQ86Y25 554 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 AFAP1L2Q8N4X5 818 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 KDM1BQ8NB78 822 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 SLC26A7Q8TE54 656 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 PSMG2Q969U7 264 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 MFSD1Q9H3U5 465 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 ZNF385DQ9H6B1 395 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 GPBP1L1Q9HC44 474 aaPredicted RBP22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 MARCH2Q9P0N8 246 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 KIF3CO14782 793 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 KIF1CO43896 1103 aaKnown RBP22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 RAMP2O60895 175 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 PDE5AO76074 875 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 PBX3P40426 434 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 MAXP61244 160 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 SATB1Q01826 763 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 NSUN2Q08J23 767 aaKnown RBP eCLIP22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 CCNIQ14094 377 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 ACAP2Q15057 778 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 CILP2Q8IUL8 1156 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 PLCD3Q8N3E9 789 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 SPATA6LQ8N4H0 392 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 LINC01599Q8WXQ3 324 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 CAPNS2Q96L46 248 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 KLHL5Q96PQ7 755 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 TSEN34Q9BSV6 310 aaKnown RBP22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 POMKQ9H5K3 350 aa22.42■■□□□ 1.18
NKX2-1-201ENST00000354822 DOCK4Q8N1I0 1966 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 LOC285095A0A1B0GVY8 99 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 KPNA1P52294 538 aaPredicted RBP22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 DSC2Q02487 901 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 RING1Q06587 406 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 BTG3Q14201 252 aaPredicted RBP22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 CSHL1Q14406 222 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 TECRLQ5HYJ1 363 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 NXNQ6DKJ4 435 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 DHDDSQ86SQ9 333 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 HPS6Q86YV9 775 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 TXNDC5Q8NBS9 432 aaKnown RBP22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 ATAD1Q8NBU5 361 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 OR13J1Q8NGT2 312 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 PEX13Q92968 403 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 MAELQ96JY0 434 aaKnown RBP22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 TMEM161AQ9NX61 479 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 VPS28Q9UK41 221 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 VWA7Q9Y334 891 aa22.41■■□□□ 1.18
NKX2-1-201ENST00000354822 ZMPSTE24O75844 475 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 MAPKAPK2P49137 400 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 PFKPQ01813 784 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 SMARCB1Q12824 385 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 MBTPS1Q14703 1052 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 C10orf120Q5SQS8 335 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 RBM20Q5T481 1227 aaKnown RBP22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 RAP1GAP2Q684P5 730 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 SNX32Q86XE0 403 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 SLC22A9Q8IVM8 553 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 CEP70Q8NHQ1 597 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 RAET1EQ8TD07 263 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 IGSF8Q969P0 613 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 SPATA17Q96L03 361 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 CFHR5Q9BXR6 569 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 ACSS2Q9NR19 701 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 STK39Q9UEW8 545 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 MYLKQ15746 1914 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 AIM2O14862 343 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 IGLV3-27P01718 113 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 GALNT1Q10472 559 aaPredicted RBP22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 SERINC3Q13530 473 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 SH2D4BQ5SQS7 431 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 HECTD2Q5U5R9 776 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 FAM171A1Q5VUB5 890 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 ARRDC2Q8TBH0 407 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 SPPL2BQ8TCT7 592 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 PXYLP1Q8TE99 480 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 PYDC1Q8WXC3 89 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 UBXN10Q96LJ8 280 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 NR1H4Q96RI1 486 aaPredicted RBP22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 OLFM1Q99784 485 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms