RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 EXT2Q93063 718 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 TOP1MTQ969P6 601 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 RTP4Q96DX8 246 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 MUS81Q96NY9 551 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 POMKQ9H5K3 350 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 EPS8L2Q9H6S3 715 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 PRDM16Q9HAZ2 1276 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 CNGB3Q9NQW8 809 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 CHRAC1Q9NRG0 131 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.69□□□□□ -1.18
BRCA1-201ENST00000352993 FEM1BQ9UK73 627 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 VANGL2Q9ULK5 521 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 B3GNT3Q9Y2A9 372 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 PCDHGA3Q9Y5H0 932 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 SNX9Q9Y5X1 595 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 ANKRD34BA5PLL1 514 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 DLX3O60479 287 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 LDLRP01130 860 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 ICAM1P05362 532 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 IL7RP16871 459 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 PROZP22891 400 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 ASPAP45381 313 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 HLCSP50747 726 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 AP3M2P53677 418 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 LRP8Q14114 963 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 SQLEQ14534 574 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 INAVAQ3KP66 663 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 STEAP4Q687X5 459 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 NIPA1Q7RTP0 329 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 CCDC103Q8IW40 242 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 C7orf31Q8N865 590 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 OR7A2PQ8NGA2 310 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 EFHD2Q96C19 240 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-201ENST00000352993 PHF21BQ96EK2 531 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 MCRS1Q96EZ8 462 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 TMEM176AQ96HP8 235 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 RNF145Q96MT1 663 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 CTRCQ99895 268 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 PDCD2LQ9BRP1 358 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 OSBPL10Q9BXB5 764 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 TP63Q9H3D4 680 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-201ENST00000352993 CHST12Q9NRB3 414 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 MTMR10Q9NXD2 777 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 GDAP2Q9NXN4 497 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.69□□□□□ -1.18
BRCA1-201ENST00000352993 ADAM28Q9UKQ2 775 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 ACOT9Q9Y305 439 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 C16orf96A6NNT2 1141 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 EIF3FO00303 357 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 DAB1O75553 588 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 CAPNS1P04632 268 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 EIF2S1P05198 315 aaKnown RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 GOT1P17174 413 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 YWHAQP27348 245 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 OXTRP30559 389 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 MAGEA6P43360 314 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 HSD17B4P51659 736 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 PLA2G16P53816 162 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 MPP1Q00013 466 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 SELENBP1Q13228 472 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 CERCAMQ5T4B2 595 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 FAM219BQ5XKK7 198 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 ZNF773Q6PK81 442 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 CCDC81Q6ZN84 652 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 STK32CQ86UX6 486 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 PACRGLQ8N7B6 248 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 MFSD2AQ8NA29 543 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 OR13F1Q8NGS4 319 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 DNAJB14Q8TBM8 379 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 NXNL1Q96CM4 212 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 DOK1Q99704 481 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 ZBED2Q9BTP6 218 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 MIR1-1HGQ9H1L0 117 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 ADAMTS10Q9H324 1103 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 SLC38A10Q9HBR0 1119 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 FBRSL1Q9HCM7 1045 aaKnown RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 JPH1Q9HDC5 661 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 CD320Q9NPF0 282 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 CCM2LQ9NUG4 571 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 KLHL3Q9UH77 587 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 TLL2Q9Y6L7 1015 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 TRIM64CA6NLI5 447 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 TRIM24O15164 1050 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 GUCY1B2O75343 617 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 BCAS1O75363 584 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 MBL2P11226 248 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 PCNAP12004 261 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 MLNP12872 115 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 HMGB2P26583 209 aaKnown RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 TNK2Q07912 1038 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 CLPPQ16740 277 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-201ENST00000352993 FAM83EQ2M2I3 478 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 VPS26BQ4G0F5 336 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 C6orf10Q5SRN2 563 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 ATAD3BQ5T9A4 648 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 PPP2R2DQ66LE6 453 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 PYROXD2Q8N2H3 581 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 C12orf29Q8N999 325 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 POC5Q8NA72 575 aa7.68□□□□□ -1.18
BRCA1-201ENST00000352993 SGCDQ92629 289 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms