RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 MIPEPQ99797 713 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 CDH19Q9H159 772 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 TAS2R1Q9NYW7 299 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 TBX21Q9UL17 535 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 RIMKLBQ9ULI2 386 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 YIPF1Q9Y548 306 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-201ENST00000350028 A0A0D9SEW6 157 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 CARNS1A5YM72 827 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 SPECC1L-ADORA2AF8WAN1 911 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 MUSKO15146 869 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 CORO1AP31146 461 aaKnown RBP16.82■□□□□ 0.28
SAMM50-201ENST00000350028 OXCT1P55809 520 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 PRAMEP78395 509 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 ACVR1Q04771 509 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 ZNF177Q13360 481 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-201ENST00000350028 RINLQ6ZS11 566 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 SETD3Q86TU7 594 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-201ENST00000350028 AGAP11Q8TF27 550 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 TOP1MTQ969P6 601 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 NXNL1Q96CM4 212 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 ZNF689Q96CS4 500 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-201ENST00000350028 OMDQ99983 421 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 MGME1Q9BQP7 344 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 KLF16Q9BXK1 252 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-201ENST00000350028 DRC3Q9H069 523 aa16.82■□□□□ 0.28
SAMM50-201ENST00000350028 ILKAPQ9H0C8 392 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-201ENST00000350028 UBA2Q9UBT2 640 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-201ENST00000350028 ABHD14A-ACY1A0A1B0GW23 586 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 TK2O00142 265 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 LDB2O43679 373 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 NDST3O95803 873 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 KLKB1P03952 638 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 ENO1P06733 434 aaKnown RBP16.81■□□□□ 0.28
SAMM50-201ENST00000350028 RHOCP08134 193 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 AOC1P19801 751 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 CES1P23141 567 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 RPS24P62847 133 aaKnown RBP16.81■□□□□ 0.28
SAMM50-201ENST00000350028 RAB33AQ14088 237 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 CFAP157Q5JU67 520 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 SWT1Q5T5J6 900 aaKnown RBP16.81■□□□□ 0.28
SAMM50-201ENST00000350028 ADGRF1Q5T601 910 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 ICE2Q659A1 982 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 MAVSQ7Z434 540 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 TMPRSS6Q8IU80 811 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 ARHGAP24Q8N264 748 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 TEX9Q8N6V9 391 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 OR6P1Q8NGX9 317 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 HDAC10Q969S8 669 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 PSKH2Q96QS6 385 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 MRPL57Q9BQC6 102 aaKnown RBP16.81■□□□□ 0.28
SAMM50-201ENST00000350028 SPON2Q9BUD6 331 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 CINPQ9BW66 212 aaPredicted RBP16.81■□□□□ 0.28
SAMM50-201ENST00000350028 MRPL46Q9H2W6 279 aaKnown RBP16.81■□□□□ 0.28
SAMM50-201ENST00000350028 MMADHCQ9H3L0 296 aaPredicted RBP16.81■□□□□ 0.28
SAMM50-201ENST00000350028 RAP2CQ9Y3L5 183 aa16.81■□□□□ 0.28
SAMM50-201ENST00000350028 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.8■□□□□ 0.28
SAMM50-201ENST00000350028 A0A1B0GVM2 712 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 TCAF2A6NFQ2 919 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 B2RBV5 119 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 DLG1Q12959 904 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 PLD1Q13393 1074 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 PTAR1Q7Z6K3 402 aaPredicted RBP16.8■□□□□ 0.28
SAMM50-201ENST00000350028 CILP2Q8IUL8 1156 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 HERC6Q8IVU3 1022 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 TTC8Q8TAM2 541 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 BRSK1Q8TDC3 778 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 PDCD6IPQ8WUM4 868 aaKnown RBP16.8■□□□□ 0.28
SAMM50-201ENST00000350028 SCG3Q8WXD2 468 aaKnown RBP16.8■□□□□ 0.28
SAMM50-201ENST00000350028 PRICKLE1Q96MT3 831 aaPredicted RBP16.8■□□□□ 0.28
SAMM50-201ENST00000350028 CRISPLD2Q9H0B8 497 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 GKN1Q9NS71 199 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 TMEM39AQ9NV64 488 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.8■□□□□ 0.28
SAMM50-201ENST00000350028 COL4A6Q14031 1691 aa16.8■□□□□ 0.28
SAMM50-201ENST00000350028 KIAA0100Q14667 2235 aaKnown RBP16.79■□□□□ 0.28
SAMM50-201ENST00000350028 PRR5-ARHGAP8B1AHC4 643 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 SNUPNO95149 360 aaKnown RBP16.79■□□□□ 0.28
SAMM50-201ENST00000350028 LAG3P18627 525 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 ELF1P32519 619 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 GRIA4P48058 902 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 GLRBP48167 497 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 ARHGAP8P85298 464 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 RCN2Q14257 317 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 ZNF460Q14592 562 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 FAM83EQ2M2I3 478 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 RBM20Q5T481 1227 aaKnown RBP16.79■□□□□ 0.28
SAMM50-201ENST00000350028 AGAP9Q5VTM2 703 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 EPGNQ6UW88 154 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 ZNF781Q8N8C0 355 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 TDRD5Q8NAT2 981 aaKnown RBP16.79■□□□□ 0.28
SAMM50-201ENST00000350028 OR52K2Q8NGK3 314 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 GPR150Q8NGU9 434 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 MCUR1Q96AQ8 359 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 VWCEQ96DN2 955 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 RNF38Q9H0F5 515 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 SPG21Q9NZD8 308 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 XPR1Q9UBH6 696 aa16.79■□□□□ 0.28
SAMM50-201ENST00000350028 AGO1Q9UL18 857 aaKnown RBP16.79■□□□□ 0.28
SAMM50-201ENST00000350028 MAFFQ9ULX9 164 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms