RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 HMX2A2RU54 273 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 ANKRD66B4E2M5 251 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 TRAFD1O14545 582 aaPredicted RBP11.07□□□□□ -0.64
ECM1-201ENST00000346569 HTRA2O43464 458 aaPredicted RBP11.07□□□□□ -0.64
ECM1-201ENST00000346569 LDB2O43679 373 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 ADH1CP00326 375 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 INHBAP08476 426 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 ERVK-10P10266 1014 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 ARNTP27540 789 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 MTHFRP42898 656 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 STK19P49842 368 aaPredicted RBP11.07□□□□□ -0.64
ECM1-201ENST00000346569 AP1S1P61966 158 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 ECT2LQ008S8 904 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 ACVR1Q04771 509 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 TRAF2Q12933 501 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 TMED2Q15363 201 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 CNGA3Q16281 694 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 GEN1Q17RS7 908 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 ATXN7L2Q5T6C5 722 aaPredicted RBP11.07□□□□□ -0.64
ECM1-201ENST00000346569 TSTD2Q5T7W7 516 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 TAOK1Q7L7X3 1001 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 C12orf40Q86WS4 652 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 CTAGE3PQ8IX95 158 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 ARFGAP2Q8N6H7 521 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 PPHLN1Q8NEY8 458 aaKnown RBP11.07□□□□□ -0.64
ECM1-201ENST00000346569 SPOCK2Q92563 424 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 PEX13Q92968 403 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 ELSPBP1Q96BH3 223 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 ZFYVE19Q96K21 471 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 MRGPRX3Q96LB0 322 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 MCMBPQ9BTE3 642 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 CEP44Q9C0F1 390 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 ECT2Q9H8V3 914 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 CLDND1Q9NY35 253 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 SENP1Q9P0U3 644 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 SLC2A6Q9UGQ3 507 aa11.07□□□□□ -0.64
ECM1-201ENST00000346569 DOCK8Q8NF50 2099 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 CUL9Q8IWT3 2517 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 IQANK1A0A1B0GTG1 560 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.06□□□□□ -0.64
ECM1-201ENST00000346569 SIN3BO75182 1162 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 TULP3O75386 442 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 GSRP00390 522 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 SNRPAP09012 282 aaKnown RBP11.06□□□□□ -0.64
ECM1-201ENST00000346569 POLR2EP19388 210 aaKnown RBP11.06□□□□□ -0.64
ECM1-201ENST00000346569 HPDP32754 393 aaPredicted RBP11.06□□□□□ -0.64
ECM1-201ENST00000346569 DGKGP49619 791 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 SERPINB9P50453 376 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 MPP2Q14168 576 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 DLG2Q15700 870 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 MYLK3Q32MK0 819 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 HSP90AA5PQ58FG0 334 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 PDPK2PQ6A1A2 396 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 KIAA0930Q6ICG6 404 aaPredicted RBP11.06□□□□□ -0.64
ECM1-201ENST00000346569 PARM1Q6UWI2 310 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 TIFABQ6ZNK6 161 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 NLRP9Q7RTR0 991 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 AHI1Q8N157 1196 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 PCDH20Q8N6Y1 951 aaKnown RBP11.06□□□□□ -0.64
ECM1-201ENST00000346569 ST13P5Q8NFI4 369 aaPredicted RBP11.06□□□□□ -0.64
ECM1-201ENST00000346569 OR2AP1Q8NGE2 309 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 WFIKKN2Q8TEU8 576 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 FRS2Q8WU20 508 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 PIH1D2Q8WWB5 315 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 SUSD6Q92537 303 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 CDKL2Q92772 493 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 MYO19Q96H55 970 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 FAM161BQ96MY7 647 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 CDX2Q99626 313 aaPredicted RBP11.06□□□□□ -0.64
ECM1-201ENST00000346569 CPEB1Q9BZB8 566 aaKnown RBP11.06□□□□□ -0.64
ECM1-201ENST00000346569 TM6SF2Q9BZW4 377 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 EBF3Q9H4W6 596 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 POMKQ9H5K3 350 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 IL1RAPL1Q9NZN1 696 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 EVLQ9UI08 416 aaPredicted RBP11.06□□□□□ -0.64
ECM1-201ENST00000346569 ERVW-1Q9UQF0 538 aa11.06□□□□□ -0.64
ECM1-201ENST00000346569 WASH3PC4AMC7 463 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 PSMC3P17980 439 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 KRT15P19012 456 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 SLC8A1P32418 973 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 MAPK8P45983 427 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 SLC6A11P48066 632 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 ATP1A2P50993 1020 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 SLC18A1P54219 525 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 SNRPD1P62314 119 aaKnown RBP11.05□□□□□ -0.64
ECM1-201ENST00000346569 SLC18A2Q05940 514 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 MESP2Q0VG99 397 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 DNAJC3Q13217 504 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 LAMB3Q13751 1172 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 RUNX3Q13761 415 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 GALNT3Q14435 633 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 QPCTQ16769 361 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 CARD16Q5EG05 197 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 GRTP1Q5TC63 336 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 LGSNQ5TDP6 509 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 PACS1Q6VY07 963 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 KCNMB4Q86W47 210 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 CAMK1DQ8IU85 385 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 CNTN4Q8IWV2 1026 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 SRRM1Q8IYB3 904 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms