RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CAP1Q01518 475 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 ACSBG2Q5FVE4 666 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 SMYD5Q6GMV2 418 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 RTN4RL1Q86UN2 441 aaPredicted RBP13.41□□□□□ -0.26
CASC4-202ENST00000345795 GBP5Q96PP8 586 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 GCNAQ96QF7 691 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 ACOX2Q99424 681 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 CRLS1Q9UJA2 301 aa13.41□□□□□ -0.26
CASC4-202ENST00000345795 UBXN8O00124 270 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 ZBTB14O43829 449 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 LRG1P02750 347 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 SLC10A3P09131 477 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 SKIP12755 728 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 UGT1A6P19224 532 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 UGT1A1P22309 533 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 UGT1A4P22310 534 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 UGT1A3P35503 534 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 UGT1A5P35504 534 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 RAB10P61026 200 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 HSPA14Q0VDF9 509 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 MS4A13Q5J8X5 152 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 HECTD3Q5T447 861 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 AGAP9Q5VTM2 703 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 SZRD1Q7Z422 152 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 CAMK1DQ8IU85 385 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 GANCQ8TET4 914 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 ARNTL2Q8WYA1 636 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 MARCH4Q9P2E8 410 aaPredicted RBP13.4□□□□□ -0.26
CASC4-202ENST00000345795 ATG2BQ96BY7 2078 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 RBM47A0AV96 593 aaKnown RBP13.4□□□□□ -0.26
CASC4-202ENST00000345795 CCL16O15467 120 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 LRPAP1P30533 357 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 RECQLP46063 649 aaPredicted RBP13.4□□□□□ -0.26
CASC4-202ENST00000345795 CDKN1CP49918 316 aaPredicted RBP13.4□□□□□ -0.26
CASC4-202ENST00000345795 AP2B1P63010 937 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 CDK18Q07002 472 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 ARHGEF7Q14155 803 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 LBRQ14739 615 aaKnown RBP13.4□□□□□ -0.26
CASC4-202ENST00000345795 PRKD1Q15139 912 aaPredicted RBP13.4□□□□□ -0.26
CASC4-202ENST00000345795 TEDDM1Q5T9Z0 273 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 TIGD7Q6NT04 549 aaPredicted RBP13.4□□□□□ -0.26
CASC4-202ENST00000345795 CDYL2Q8N8U2 506 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 KCNA7Q96RP8 456 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 COPS7BQ9H9Q2 264 aaPredicted RBP13.4□□□□□ -0.26
CASC4-202ENST00000345795 NUMBLQ9Y6R0 609 aa13.4□□□□□ -0.26
CASC4-202ENST00000345795 A0A1W2PRU2 124 aa13.4□□□□□ -0.27
CASC4-202ENST00000345795 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.4□□□□□ -0.27
CASC4-202ENST00000345795 PER2O15055 1255 aa13.4□□□□□ -0.27
CASC4-202ENST00000345795 PSMC3P17980 439 aa13.4□□□□□ -0.27
CASC4-202ENST00000345795 CRHR1P34998 444 aa13.4□□□□□ -0.27
CASC4-202ENST00000345795 PPIDQ08752 370 aaKnown RBP13.4□□□□□ -0.27
CASC4-202ENST00000345795 PLPP4Q5VZY2 271 aa13.4□□□□□ -0.27
CASC4-202ENST00000345795 MRNIPQ6NTE8 343 aa13.4□□□□□ -0.27
CASC4-202ENST00000345795 ALKAL1Q6UXT8 129 aa13.4□□□□□ -0.27
CASC4-202ENST00000345795 TDRPQ86YL5 185 aa13.4□□□□□ -0.27
CASC4-202ENST00000345795 CLHC1Q8NHS4 586 aa13.4□□□□□ -0.27
CASC4-202ENST00000345795 MIPEPQ99797 713 aa13.4□□□□□ -0.27
CASC4-202ENST00000345795 RTP3Q9BQQ7 232 aa13.4□□□□□ -0.27
CASC4-202ENST00000345795 PPCSQ9HAB8 311 aa13.4□□□□□ -0.27
CASC4-202ENST00000345795 FAM159BA6NKW6 160 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 AKAP10O43572 662 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 EFNA1P20827 205 aaPredicted RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 TACR2P21452 398 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 LIMK2P53671 638 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 PPP1R3AQ16821 1122 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 ULK2Q8IYT8 1036 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 CMTM5Q96DZ9 223 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 NAF1Q96HR8 494 aaKnown RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 CNBD2Q96M20 576 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 RNPEPL1Q9HAU8 725 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 APPL1Q9UKG1 709 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 SOX13Q9UN79 622 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 C15orf41Q9Y2V0 281 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 SNX13Q9Y5W8 968 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 RP1L1Q8IWN7 2480 aaPredicted RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 HEATR9A2RTY3 570 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 PPP6CO00743 305 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 DLDP09622 509 aaKnown RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 NPY2RP49146 381 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 CAPRIN1Q14444 709 aaKnown RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 C2orf73Q8N5S3 287 aaPredicted RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 RTL3Q8N8U3 475 aaKnown RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 NCLNQ969V3 563 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 SUSD3Q96L08 255 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 ZFP14Q9HCL3 533 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 KANSL3Q9P2N6 904 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 C2orf81A6NN90 581 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 CCNT2O60583 730 aaKnown RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 GOT2P00505 430 aaKnown RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 JUNP05412 331 aaKnown RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 MLLT6P55198 1093 aaPredicted RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 PCLAFQ15004 111 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 PLA2G4EQ3MJ16 856 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 TRIM60Q495X7 471 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 OTUD1Q5VV17 481 aaPredicted RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 KYAT3Q6YP21 454 aaKnown RBP13.39□□□□□ -0.27
CASC4-202ENST00000345795 DNAJB14Q8TBM8 379 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 MAPK15Q8TD08 544 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 SEPHS2Q99611 448 aa13.39□□□□□ -0.27
CASC4-202ENST00000345795 ZDHHC6Q9H6R6 413 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms