RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 TPP1O14773 563 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 AQP9O43315 295 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 LZTS3O60299 673 aaPredicted RBP17.96■□□□□ 0.47
CKLF-202ENST00000345436 LRCH4O75427 683 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 BCL2L1Q07817 233 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 NFKBIBQ15653 356 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 FAXCQ5TGI0 409 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 ZNF548Q8NEK5 533 aaPredicted RBP17.96■□□□□ 0.47
CKLF-202ENST00000345436 EXOC2Q96KP1 924 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 KCTD15Q96SI1 283 aaPredicted RBP17.96■□□□□ 0.47
CKLF-202ENST00000345436 FUCA2Q9BTY2 467 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 WRAP53Q9BUR4 548 aaKnown RBP17.96■□□□□ 0.47
CKLF-202ENST00000345436 PDFQ9HBH1 243 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 HAUS2Q9NVX0 235 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 SALL4Q9UJQ4 1053 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 CAPN11Q9UMQ6 739 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.96■□□□□ 0.47
CKLF-202ENST00000345436 TRPM6Q9BX84 2022 aa17.96■□□□□ 0.47
CKLF-202ENST00000345436 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.95■□□□□ 0.46
CKLF-202ENST00000345436 MYO1FO00160 1098 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 SERPINB6P35237 376 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 HSPA9P38646 679 aaKnown RBP17.95■□□□□ 0.46
CKLF-202ENST00000345436 PPARDQ03181 441 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 CA9Q16790 459 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 HADHQ16836 314 aaKnown RBP17.95■□□□□ 0.46
CKLF-202ENST00000345436 TMCO3Q6UWJ1 677 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 LUZP1Q86V48 1076 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 SDR16C5Q8N3Y7 309 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 TPCN2Q8NHX9 752 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 LMX1AQ8TE12 382 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 CPLX3Q8WVH0 158 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 APOLD1Q96LR9 279 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 PCDH12Q9NPG4 1184 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 SCUBE2Q9NQ36 999 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 CWC15Q9P013 229 aaKnown RBP17.95■□□□□ 0.46
CKLF-202ENST00000345436 LCMT1Q9UIC8 334 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 DOLKQ9UPQ8 538 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 ATP8A1Q9Y2Q0 1164 aa17.95■□□□□ 0.46
CKLF-202ENST00000345436 KNTC1P50748 2209 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 TSPAN11A1L157 253 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 INSIG1O15503 277 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 RRP8O43159 456 aaKnown RBP17.94■□□□□ 0.46
CKLF-202ENST00000345436 PIGNO95427 931 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 MT-CO3P00414 261 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 ANXA6P08133 673 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 EIF4A3P38919 411 aaKnown RBP17.94■□□□□ 0.46
CKLF-202ENST00000345436 AP1S1P61966 158 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 ZNF235Q14590 738 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 DPYSL2Q16555 572 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 TSR1Q2NL82 804 aaKnown RBP17.94■□□□□ 0.46
CKLF-202ENST00000345436 SKOR2Q2VWA4 1001 aaPredicted RBP17.94■□□□□ 0.46
CKLF-202ENST00000345436 AFMIDQ63HM1 303 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 MACC1Q6ZN28 852 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 LRRC69Q6ZNQ3 347 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 LRRC49Q8IUZ0 686 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 FSTL5Q8N475 847 aaPredicted RBP17.94■□□□□ 0.46
CKLF-202ENST00000345436 ARFGAP1Q8N6T3 406 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 TEKT4Q8WW24 435 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 DEPDC7Q96QD5 511 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 PEBP4Q96S96 227 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 KCTD5Q9NXV2 234 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 APOBEC3BQ9UH17 382 aaKnown RBP17.94■□□□□ 0.46
CKLF-202ENST00000345436 GGT7Q9UJ14 662 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 RAXQ9Y2V3 346 aa17.94■□□□□ 0.46
CKLF-202ENST00000345436 GOLGA4Q13439 2230 aaKnown RBP17.94■□□□□ 0.46
CKLF-202ENST00000345436 DMXL2Q8TDJ6 3036 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 ALPIP09923 528 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 KRT10P13645 584 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 CTSEP14091 401 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 SSR1P43307 286 aaKnown RBP17.93■□□□□ 0.46
CKLF-202ENST00000345436 LIG3P49916 1009 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 SCNN1BP51168 640 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 INSM1Q01101 510 aaPredicted RBP17.93■□□□□ 0.46
CKLF-202ENST00000345436 DPYSQ14117 519 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 KRT81Q14533 505 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 LBRQ14739 615 aaKnown RBP17.93■□□□□ 0.46
CKLF-202ENST00000345436 RTP5Q14D33 572 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 ELOCQ15369 112 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 NR0B2Q15466 257 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 PRRT3Q5FWE3 981 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 LRRC73Q5JTD7 316 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 ESRP1Q6NXG1 681 aaKnown RBP17.93■□□□□ 0.46
CKLF-202ENST00000345436 MARCH9Q86YJ5 346 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 CAMK1DQ8IU85 385 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 DCBLD1Q8N8Z6 715 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 NETO2Q8NC67 525 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 TSEN2Q8NCE0 465 aaKnown RBP17.93■□□□□ 0.46
CKLF-202ENST00000345436 HSPH1Q92598 858 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 GRAMD1AQ96CP6 724 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 PSKH2Q96QS6 385 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.93■□□□□ 0.46
CKLF-202ENST00000345436 GPSM3Q9Y4H4 160 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 CHD5Q8TDI0 1954 aa17.93■□□□□ 0.46
CKLF-202ENST00000345436 CHD6Q8TD26 2715 aa17.92■□□□□ 0.46
CKLF-202ENST00000345436 SPINT1O43278 529 aa17.92■□□□□ 0.46
CKLF-202ENST00000345436 OPA1O60313 960 aa17.92■□□□□ 0.46
CKLF-202ENST00000345436 TPM1P09493 284 aa17.92■□□□□ 0.46
CKLF-202ENST00000345436 C6P13671 934 aa17.92■□□□□ 0.46
CKLF-202ENST00000345436 KELP23276 732 aa17.92■□□□□ 0.46
CKLF-202ENST00000345436 ACTN2P35609 894 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms