RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 IFNGR2P38484 337 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 ZC3H12AQ5D1E8 599 aaKnown RBP18.18■□□□□ 0.5
SMC4-201ENST00000344722 KRT78Q8N1N4 520 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 ROPN1LQ96C74 230 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 PCDHGC3Q9UN70 934 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 ATP6AP2A0A1C7CYW4 349 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 DDTLA6NHG4 134 aaPredicted RBP18.18■□□□□ 0.5
SMC4-201ENST00000344722 SSNA1O43805 119 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 ATP6AP2O75787 350 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 ITGA2P17301 1181 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 HPCAL1P37235 193 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 NEK5Q6P3R8 708 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 TXNDC11Q6PKC3 985 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 ZYG11AQ6WRX3 759 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 CAB39LQ9H9S4 337 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 SAMHD1Q9Y3Z3 626 aaKnown RBP18.18■□□□□ 0.5
SMC4-201ENST00000344722 DIP2CQ9Y2E4 1556 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 PLK4O00444 970 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 ERBB2P04626 1255 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 IRF1P10914 325 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 MMP8P22894 467 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 MTHFRP42898 656 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 ANKRD22Q5VYY1 191 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 SYT12Q8IV01 421 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 WNT8BQ93098 351 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 SP140LQ9H930 580 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 PIM2Q9P1W9 311 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 PEX6Q13608 980 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 LSM12Q3MHD2 195 aaKnown RBP18.18■□□□□ 0.5
SMC4-201ENST00000344722 WDR70Q9NW82 654 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 ZNRF3Q9ULT6 936 aa18.18■□□□□ 0.5
SMC4-201ENST00000344722 LRIG2O94898 1065 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 CSNK2BP67870 215 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 FAM131AQ6UXB0 335 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 FAXDC2Q96IV6 333 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 NODALQ96S42 347 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 CD320Q9NPF0 282 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 KLHL28Q9NXS3 571 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 PEX16Q9Y5Y5 336 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 SMIM22K7EJ46 135 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 CYP2A7P20853 494 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 PSMA3P25788 255 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 CYP4F2P78329 520 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 CYP4F3Q08477 520 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 IL18R1Q13478 541 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 NIPAL1Q6NVV3 410 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 PLET1Q6UQ28 207 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 ABI2Q9NYB9 513 aaPredicted RBP18.17■□□□□ 0.5
SMC4-201ENST00000344722 ATF5Q9Y2D1 282 aaPredicted RBP18.17■□□□□ 0.5
SMC4-201ENST00000344722 TCHHQ07283 1943 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 TTLL13PA6NNM8 815 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 H3BSA7 217 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 PSMD11O00231 422 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 BCKDKO14874 412 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 TUBP50607 506 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 LGALS3BPQ08380 585 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 STXBP5Q5T5C0 1151 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 GLYATQ6IB77 296 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 NXNL1Q96CM4 212 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 VPS35Q96QK1 796 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 PORCNQ9H237 461 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 UGT1A9O60656 530 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 RNASEH1O60930 286 aaKnown RBP18.17■□□□□ 0.5
SMC4-201ENST00000344722 STAU1O95793 577 aaKnown RBP18.17■□□□□ 0.5
SMC4-201ENST00000344722 LINC00032P0C843 101 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 COX7A2P14406 83 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 UGT1A6P19224 532 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 UGT1A1P22309 533 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 UGT1A4P22310 534 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 UGT1A3P35503 534 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 UGT1A5P35504 534 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 ABATP80404 500 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 STX4Q12846 297 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 C16orf62Q7Z3J2 963 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 LPCAT1Q8NF37 534 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 EDEM1Q92611 657 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 HSPBAP1Q96EW2 488 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 UGT1A7Q9HAW7 530 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 UGT1A10Q9HAW8 530 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 UGT1A8Q9HAW9 530 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 POLLQ9UGP5 575 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 CORO2BQ9UQ03 480 aa18.17■□□□□ 0.5
SMC4-201ENST00000344722 GPRIN3Q6ZVF9 776 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 CPSF7Q8N684 471 aaKnown RBP18.16■□□□□ 0.5
SMC4-201ENST00000344722 FAM163AQ96GL9 167 aaPredicted RBP18.16■□□□□ 0.5
SMC4-201ENST00000344722 PANX3Q96QZ0 392 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 MARCH7Q9H992 704 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 PDE10AQ9Y233 779 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 SEMA3DO95025 777 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 MAGP20916 626 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 CARTPTQ16568 116 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 NCCRP1Q6ZVX7 275 aaPredicted RBP18.16■□□□□ 0.5
SMC4-201ENST00000344722 OR2T12Q8NG77 320 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 SLC2A14Q8TDB8 520 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 FDXACB1Q9BRP7 624 aaPredicted RBP18.16■□□□□ 0.5
SMC4-201ENST00000344722 PRDM12Q9H4Q4 367 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 SLC28A1O00337 649 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 DYNC1LI2O43237 492 aaPredicted RBP18.16■□□□□ 0.5
SMC4-201ENST00000344722 GRK3P35626 688 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 HELQQ8TDG4 1101 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms