RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ARIH2O95376 493 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ENPP1P22413 925 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 AIF1P55008 147 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 TFDP2Q14188 446 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 TXNDC5Q8NBS9 432 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SH3RF3Q8TEJ3 882 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM121Q9BTD3 319 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 EIF2B3Q9NR50 452 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 BFARQ9NZS9 450 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 LRRC7Q96NW7 1537 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RETP07949 1114 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 DGKQP52824 942 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 KCNQ4P56696 695 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PPP2R2BQ00005 443 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 GK3PQ14409 553 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PTGES3Q15185 160 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 UGT3A1Q6NUS8 523 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 LETMD1Q6P1Q0 360 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 EXD1Q8NHP7 514 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 AGR3Q8TD06 166 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PTCD3Q96EY7 689 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SLC35C2Q9NQQ7 365 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 NOD1Q9Y239 953 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 HSPE1-MOB4S4R3N1 261 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZSCAN5BA6NJL1 495 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 TBX3O15119 743 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SERPINA6P08185 405 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 UCHL1P09936 223 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF699Q32M78 642 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 MTX3Q5HYI7 312 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CDKL4Q5MAI5 379 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SSX9Q7RTT3 188 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 TMC3Q7Z5M5 1100 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 TFAP2DQ7Z6R9 452 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 GDPD1Q8N9F7 314 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PPEF2O14830 753 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 APEHP13798 732 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SLC1A3P43003 542 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 HADHBP55084 474 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SH3D19Q5HYK7 790 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 IZUMO1Q8IYV9 350 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 FOLH1BQ9HBA9 442 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 GPRC5BQ9NZH0 403 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 DNAJC16Q9Y2G8 782 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ETS2P15036 469 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PRKD1Q15139 912 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 MAN2A1Q16706 1144 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 KRBOX4Q5JUW0 171 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF852Q6ZMS4 543 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 DHRSXQ8N5I4 330 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 OR6S1Q8NH40 331 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CLIC5Q9NZA1 410 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RALAP11233 206 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 IL1R1P14778 569 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 GRIA4P48058 902 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 QPCTQ16769 361 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RABL3Q5HYI8 236 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SCML4Q8N228 414 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ASB2Q96Q27 587 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PTCH2Q9Y6C5 1203 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM120BA0PK00 339 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZSCAN5CA6NGD5 496 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ENO3P13929 434 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 RANP62826 216 aaKnown RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 FOLH1Q04609 750 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 NECTIN1Q15223 517 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 CCNYL2Q5T2Q4 361 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF444Q8N0Y2 327 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 APBA2Q99767 749 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 DCUN1D5Q9BTE7 237 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZSCAN5AQ9BUG6 496 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZFP57Q9NU63 452 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PCDHGA1Q9Y5H4 931 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 SNCAIPQ9Y6H5 919 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 NEURL4Q96JN8 1562 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 A0A0D9SFI3 127 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 FOXO6A8MYZ6 492 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 TLR2O60603 784 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 GYS1P13807 737 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF14P17017 642 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-202ENST00000344113 PAX6P26367 422 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 GLYCTKQ8IVS8 523 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 ZHX1-C8orf76Q96EF9 292 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 USP44Q9H0E7 712 aa3.79□□□□□ -1.8
SYNE2-202ENST00000344113 GSC2O15499 205 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SLC2A1P11166 492 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SOX11P35716 441 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PPP5CP53041 499 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SLC3A1Q07837 685 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RFTN1Q14699 578 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 KATNAL2Q8IYT4 538 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 EEF1AKMT1Q8WVE0 214 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 GGA3Q9NZ52 723 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PRKAG3Q9UGI9 489 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SEPT9Q9UHD8 586 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF112Q9UJU3 913 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PCDHA7Q9UN72 937 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PCDHB13Q9Y5F0 798 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RBM8AQ9Y5S9 174 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CLOCKO15516 846 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms