RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CBLBQ13191 982 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 PON2Q15165 354 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 ZBTB33Q86T24 672 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 METTL16Q86W50 562 aaKnown RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 TIPINQ9BVW5 301 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 KCNN3Q9UGI6 736 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 PSME2Q9UL46 239 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 NBASA2RRP1 2371 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 GREB1LQ9C091 1923 aaPredicted RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 KIAA0391O15091 583 aaKnown RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 TBX1O43435 398 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 CSPG5O95196 566 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 CST1P01037 141 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 UGT2B4P06133 528 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 CYP2C9P11712 490 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 CASP1P29466 404 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 GLRBP48167 497 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 ST3GAL1Q11201 340 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 GRTP1Q5TC63 336 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 C11orf96Q7Z7L8 435 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 WDSUB1Q8N9V3 476 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 LEMD2Q8NC56 503 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 ADCY4Q8NFM4 1077 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 OR52K1Q8NGK4 314 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 CEP76Q8TAP6 659 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 ZNF420Q8TAQ5 688 aaPredicted RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 OSBP2Q969R2 916 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 DCAF5Q96JK2 942 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 FAM167AQ96KS9 214 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 MARK4Q96L34 752 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 RIT2Q99578 217 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 SLC30A2Q9BRI3 323 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 SIK2Q9H0K1 926 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 NEURL1BA8MQ27 555 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 ERN1O75460 977 aaKnown RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 SLC16A8O95907 504 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 DNTTP04053 509 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 MTHFRP42898 656 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 CAV3P56539 151 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 CAMK2GQ13555 558 aaPredicted RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 ARHGEF7Q14155 803 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 RNF151Q2KHN1 245 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 GALNTL5Q7Z4T8 443 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 NFATC2IPQ8NCF5 419 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 POC1BQ8TC44 478 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 SDR42E1Q8WUS8 393 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 KLF6Q99612 283 aaPredicted RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 FAM86C1Q9NVL1 165 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 PSMD13Q9UNM6 376 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 NAALADL1Q9UQQ1 740 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 NEDD8-MDP1E9PL57 170 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 VAPBO95292 243 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 STAU1O95793 577 aaKnown RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 GSTT2P0CG29 244 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 GPR15P49685 360 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 SULT1E1P49888 294 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 RGS8P57771 180 aaPredicted RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 DCDC1P59894 354 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 NFX1Q12986 1120 aaKnown RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 EZH2Q15910 746 aaKnown RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 ZYXQ15942 572 aaKnown RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 PCSK7Q16549 785 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 PLA2G4FQ68DD2 849 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 IPMKQ8NFU5 416 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 CPA5Q8WXQ8 436 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 MED8Q96G25 268 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 MRPL4Q9BYD3 311 aaKnown RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 PPA2Q9H2U2 334 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 SMURF2Q9HAU4 748 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 PREBQ9HCU5 417 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 DMGDHQ9UI17 866 aaKnown RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 ACSL5Q9ULC5 683 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 NCF1BA6NI72 391 aaPredicted RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 NCF1CA8MVU1 366 aaPredicted RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 PDXKO00764 312 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 NCF1P14598 390 aaPredicted RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 VAMP1P23763 118 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 PDK2Q15119 407 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 BATFQ16520 125 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 PDK4Q16654 411 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 C2orf76Q3KRA6 126 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 ZIK1Q3SY52 487 aaPredicted RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 GPRC6AQ5T6X5 926 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 PTCHD4Q6ZW05 846 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 KDELC2Q7Z4H8 507 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 FNDC8Q8TC99 324 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 ING5Q8WYH8 240 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 MAGEB10Q96LZ2 347 aaPredicted RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 RMDN3Q96TC7 470 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 ACACAQ13085 2346 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 POLRMTO00411 1230 aaKnown RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 IL1R1P14778 569 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 EPCAMP16422 314 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 PKNOX1P55347 436 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 VAMP2P63027 116 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 SKP1P63208 163 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 MBTD1Q05BQ5 628 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 FGL1Q08830 312 aa6.2□□□□□ -1.42
VCAN-203ENST00000343200 DDX39BQ13838 428 aaKnown RBP6.2□□□□□ -1.42
VCAN-203ENST00000343200 RAB30Q15771 203 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms