RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SPRTNQ9H040 489 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-202ENST00000342494 CENPXA8MT69 81 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 CLOCKO15516 846 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 TREHO43280 583 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 PRMT3O60678 531 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 OR4L1Q8NH43 312 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 ZSCAN18Q8TBC5 510 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-202ENST00000342494 HEXDCQ8WVB3 486 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 DTNBP1Q96EV8 351 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 HSD17B14Q9BPX1 270 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 ANAPC2Q9UJX6 822 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 SMIM28A0A1B0GU29 152 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 KDM4FA0A1W2PPD8 638 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 RNASEH2AO75792 299 aaKnown RBP15.1■□□□□ 0.01
UBE3B-202ENST00000342494 EPHX1P07099 455 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 RPL22P35268 128 aaKnown RBP15.1■□□□□ 0.01
UBE3B-202ENST00000342494 ZNF618Q5T7W0 954 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 AADACL2Q6P093 401 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 R3HCC1LQ7Z5L2 792 aaKnown RBP15.1■□□□□ 0.01
UBE3B-202ENST00000342494 SHC3Q92529 594 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 BTN2A3PQ96KV6 586 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 ANGPT4Q9Y264 503 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 TPRKBQ9Y3C4 175 aa15.1■□□□□ 0.01
UBE3B-202ENST00000342494 ZNF541Q9H0D2 1346 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 E7ENQ6 273 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 NBNO60934 754 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 PSMD8P48556 350 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 SH3BP5LQ7L8J4 393 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 PTF1AQ7RTS3 328 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 TIFAQ96CG3 184 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 DNAJC19Q96DA6 116 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 KLHL5Q96PQ7 755 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 REXO4Q9GZR2 422 aaKnown RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 NDUFA13Q9P0J0 144 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 RPL4P36578 427 aaKnown RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 ST13P50502 369 aaKnown RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 NOMO3P69849 1222 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 RAVER1Q8IY67 606 aaKnown RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 CACTIN-AS1Q8N1I8 211 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 INPP4AQ96PE3 977 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 ACAT2Q9BWD1 397 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 MRPS17Q9Y2R5 130 aaKnown RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 PTPRJQ12913 1337 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 TMEM191CA6NGB0 347 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 ENO4A6NNW6 628 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 CCNDBP1O95273 360 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 OTCP00480 354 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 CORO1AP31146 461 aaKnown RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 IFI35P80217 286 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 HYIQ5T013 277 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 CDYL2Q8N8U2 506 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 ST13P5Q8NFI4 369 aaPredicted RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 FBXO30Q8TB52 745 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 INTS7Q9NVH2 962 aaKnown RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 ARMCX1Q9P291 453 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 DDX20Q9UHI6 824 aaKnown RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 ZNF780BQ9Y6R6 833 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 SLC28A1O00337 649 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 MSI1O43347 362 aaKnown RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 HK2P52789 917 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 AIF1P55008 147 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 RAB10P61026 200 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 RPL38P63173 70 aaKnown RBP15.09■□□□□ 0.01
UBE3B-202ENST00000342494 ABHD15Q6UXT9 468 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 UXS1Q8NBZ7 420 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 TEKT5Q96M29 485 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 CYLDQ9NQC7 956 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 GMIPQ9P107 970 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 PCDHGC5Q9Y5F6 944 aa15.09■□□□□ 0.01
UBE3B-202ENST00000342494 SEPT4O43236 478 aa15.08■□□□□ 0.01
UBE3B-202ENST00000342494 KRT75O95678 551 aa15.08■□□□□ 0.01
UBE3B-202ENST00000342494 CLPTM1O96005 669 aa15.08■□□□□ 0.01
UBE3B-202ENST00000342494 FMO1Q01740 532 aa15.08■□□□□ 0.01
UBE3B-202ENST00000342494 LBX2Q6XYB7 198 aa15.08■□□□□ 0.01
UBE3B-202ENST00000342494 DENND6AQ8IWF6 608 aa15.08■□□□□ 0.01
UBE3B-202ENST00000342494 ALLCQ8N6M5 410 aa15.08■□□□□ 0.01
UBE3B-202ENST00000342494 ZNF248Q8NDW4 579 aa15.08■□□□□ 0.01
UBE3B-202ENST00000342494 ATXN2LQ8WWM7 1075 aaKnown RBP15.08■□□□□ 0.01
UBE3B-202ENST00000342494 CENPIQ92674 756 aaPredicted RBP15.08■□□□□ 0.01
UBE3B-202ENST00000342494 HDAC10Q969S8 669 aa15.08■□□□□ 0.01
UBE3B-202ENST00000342494 NDRG2Q9UN36 371 aaKnown RBP15.08■□□□□ 0.01
UBE3B-202ENST00000342494 C1RP00736 705 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 WNT3AP56704 352 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 MEA1Q16626 185 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 MAPKAPK3Q16644 382 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 GPRIN3Q6ZVF9 776 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 ILDR1Q86SU0 546 aaPredicted RBP15.08■□□□□ 0
UBE3B-202ENST00000342494 ARMC8Q8IUR7 673 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 BTBD10Q9BSF8 475 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 SUCOQ9UBS9 1254 aaKnown RBP15.08■□□□□ 0
UBE3B-202ENST00000342494 ACTL7BQ9Y614 415 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 SCN2BO60939 215 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 STX11O75558 287 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 CHST9Q7L1S5 443 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 OR6Y1Q8NGX8 325 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 USP2O75604 605 aaPredicted RBP15.08■□□□□ 0
UBE3B-202ENST00000342494 ATP6V0D1P61421 351 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 ERVK-21P61565 698 aa15.08■□□□□ 0
UBE3B-202ENST00000342494 CPSF6Q16630 551 aaKnown RBP eCLIP15.08■□□□□ 0
UBE3B-202ENST00000342494 SLC25A52Q3SY17 297 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms