RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 MAGEA11P43364 429 aa13.19□□□□□ -0.3
COL18A1-201ENST00000342220 CPA2P48052 419 aa13.19□□□□□ -0.3
COL18A1-201ENST00000342220 DSG1Q02413 1049 aa13.19□□□□□ -0.3
COL18A1-201ENST00000342220 PAFAH1B3Q15102 231 aaKnown RBP13.19□□□□□ -0.3
COL18A1-201ENST00000342220 CNPY1Q3B7I2 92 aa13.19□□□□□ -0.3
COL18A1-201ENST00000342220 TMEM240Q5SV17 173 aa13.19□□□□□ -0.3
COL18A1-201ENST00000342220 CDKL2Q92772 493 aa13.19□□□□□ -0.3
COL18A1-201ENST00000342220 EXT2Q93063 718 aa13.19□□□□□ -0.3
COL18A1-201ENST00000342220 OLFM3Q96PB7 478 aa13.19□□□□□ -0.3
COL18A1-201ENST00000342220 ZNF395Q9H8N7 513 aaPredicted RBP13.19□□□□□ -0.3
COL18A1-201ENST00000342220 BPIFA1Q9NP55 256 aa13.19□□□□□ -0.3
COL18A1-201ENST00000342220 SLC2A6Q9UGQ3 507 aa13.19□□□□□ -0.3
COL18A1-201ENST00000342220 HNRNPCL1O60812 293 aaKnown RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 E2F6O75461 281 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 KRT36O76013 467 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 PENKP01210 267 aaPredicted RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 NMBRP28336 390 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 WNT3AP56704 352 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 ACSBG2Q5FVE4 666 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 PPM1JQ5JR12 505 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 ATXN7L2Q5T6C5 722 aaPredicted RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 MCUR1Q96AQ8 359 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 HAPLN3Q96S86 360 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 EBNA1BP2Q99848 306 aaKnown RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 ABCG8Q9H221 673 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 ASAH2Q9NR71 780 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 OLA1Q9NTK5 396 aaKnown RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 TAS2R1Q9NYW7 299 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 FCF1Q9Y324 198 aaKnown RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 OR51F1A6NGY5 319 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 HACD1B0YJ81 288 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 FCHO1O14526 889 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 NVLO15381 856 aaKnown RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 STC2O76061 302 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 C1QAP02745 245 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 POLBP06746 335 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 ZCCHC18P0CG32 403 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 ESRRAP11474 423 aaPredicted RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 HMGA1P17096 107 aaKnown RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 MZF1P28698 734 aaPredicted RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 TYK2P29597 1187 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 PPM1AP35813 382 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 OXCT1P55809 520 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 PPIDQ08752 370 aaKnown RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 TMED1Q13445 227 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 RCN1Q15293 331 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 DLG2Q15700 870 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 ZCCHC23Q6ZST2 131 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 ARCQ7LC44 396 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 SLC26A11Q86WA9 606 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 ARHGAP12Q8IWW6 846 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 ZNF419Q96HQ0 510 aaPredicted RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 PPP1R36Q96LQ0 422 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 TEKT5Q96M29 485 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 MLPHQ9BV36 600 aaPredicted RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 SHCBP1LQ9BZQ2 653 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 NMUR2Q9GZQ4 415 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 TNKS2Q9H2K2 1166 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 XAB2Q9HCS7 855 aaKnown RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 AGO1Q9UL18 857 aaKnown RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 SLC39A10Q9ULF5 831 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 KCTD3Q9Y597 815 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 K7ERQ8 282 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 TRIM24O15164 1050 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 THOC5Q13769 683 aaKnown RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 TTC39BQ5VTQ0 682 aaPredicted RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 CMTM8Q8IZV2 173 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 WDR60Q8WVS4 1066 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 ZFYVE19Q96K21 471 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 CINPQ9BW66 212 aaPredicted RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 GLOD4Q9HC38 313 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 MAN1C1Q9NR34 630 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 RCOR3Q9P2K3 495 aaPredicted RBP13.18□□□□□ -0.3
COL18A1-201ENST00000342220 CCL26Q9Y258 94 aa13.18□□□□□ -0.3
COL18A1-201ENST00000342220 MAFKO60675 156 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 KRT37O76014 449 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 TGDSO95455 350 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 CCDC92Q53HC0 331 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-201ENST00000342220 FSCBQ5H9T9 825 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 CES4AQ5XG92 561 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 ESRP1Q6NXG1 681 aaKnown RBP13.17□□□□□ -0.3
COL18A1-201ENST00000342220 GAREM2Q75VX8 874 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 STRA8Q7Z7C7 330 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 DTX3LQ8TDB6 740 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 FAM161BQ96MY7 647 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 RAD9AQ99638 391 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 OSBPL2Q9H1P3 480 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 PLAC1Q9HBJ0 212 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 NMRK1Q9NWW6 199 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 ARHGEF38Q9NXL2 777 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-201ENST00000342220 NRG2O14511 850 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-201ENST00000342220 PHGDHO43175 533 aaKnown RBP13.17□□□□□ -0.3
COL18A1-201ENST00000342220 CTPS1P17812 591 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 DNAJB1P25685 340 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 GALNT2Q10471 571 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 TEAD2Q15562 447 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 BBS7Q8IWZ6 715 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 GSDMBQ8TAX9 411 aa13.17□□□□□ -0.3
COL18A1-201ENST00000342220 MOCOSQ96EN8 888 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms