RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 SAGE1Q9NXZ1 904 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 GINS2Q9Y248 185 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 CFL2Q9Y281 166 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 SLC45A1Q9Y2W3 748 aa11.96□□□□□ -0.5
RTN3-203ENST00000341307 RFPL2O75678 378 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 BCAS2O75934 225 aaPredicted RBP11.95□□□□□ -0.5
RTN3-203ENST00000341307 KCNK2O95069 426 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 KRT19P08727 400 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 FOSL1P15407 271 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 POLR2IP36954 125 aaKnown RBP11.95□□□□□ -0.5
RTN3-203ENST00000341307 LEPRP48357 1165 aaKnown RBP11.95□□□□□ -0.5
RTN3-203ENST00000341307 PKNOX1P55347 436 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 TAGLNQ01995 201 aaKnown RBP11.95□□□□□ -0.5
RTN3-203ENST00000341307 MTX3Q5HYI7 312 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 POLNQ7Z5Q5 900 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 MCOLN2Q8IZK6 566 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 MFSD4AQ8N468 514 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 RNF148Q8N7C7 305 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 PSD4Q8NDX1 1056 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 TTC9Q92623 222 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 TINF2Q9BSI4 451 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 ZNF229Q9UJW7 825 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 ANAPC7Q9UJX3 599 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 DGKBQ9Y6T7 804 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 ZBTB14O43829 449 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 FKTNO75072 461 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 ASS1P00966 412 aaKnown RBP11.95□□□□□ -0.5
RTN3-203ENST00000341307 CAPN1P07384 714 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 NFICP08651 508 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 MYF6P23409 242 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 RAP1GAPP47736 663 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 IDH3AP50213 366 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 ORC1Q13415 861 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 COL19A1Q14993 1142 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 CDK10Q15131 360 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 HIF1AQ16665 826 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 DUSP7Q16829 419 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 FAM110CQ1W6H9 321 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 CYP20A1Q6UW02 462 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 ATG14Q6ZNE5 492 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 KIAA0408Q6ZU52 694 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 KCTD20Q7Z5Y7 419 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 UBR7Q8N806 425 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 PIWIL2Q8TC59 973 aaKnown RBP11.95□□□□□ -0.5
RTN3-203ENST00000341307 VPS33AQ96AX1 596 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 METTL2AQ96IZ6 378 aaKnown RBP11.95□□□□□ -0.5
RTN3-203ENST00000341307 SP140LQ9H930 580 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 CPNE5Q9HCH3 593 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 SYTL2Q9HCH5 934 aa11.95□□□□□ -0.5
RTN3-203ENST00000341307 IPO11Q9UI26 975 aaKnown RBP11.95□□□□□ -0.5
RTN3-203ENST00000341307 ACOT8O14734 319 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 AREL1O15033 823 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 DCXO43602 365 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 MMP3P08254 477 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 TMEM191BP0C7N4 346 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 ICAM2P13598 275 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 EEF1DP29692 281 aaKnown RBP11.94□□□□□ -0.5
RTN3-203ENST00000341307 NSFP46459 744 aaKnown RBP11.94□□□□□ -0.5
RTN3-203ENST00000341307 GPLD1P80108 840 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 MTM1Q13496 603 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 TRPC3Q13507 836 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 AQP6Q13520 282 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 MAPK11Q15759 364 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 DUOXA2Q1HG44 320 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 BBS9Q3SYG4 887 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 FSCBQ5H9T9 825 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 ZNF484Q5JVG2 852 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 C6orf10Q5SRN2 563 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 MARCH8Q5T0T0 291 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 SLC9A4Q6AI14 798 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 TRAF7Q6Q0C0 670 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 FKBP9P1Q75LS8 142 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 PLEKHH3Q7Z736 793 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 SNX32Q86XE0 403 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 LURAP1LQ8IV03 231 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 PARP8Q8N3A8 854 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 FBXO36Q8NEA4 188 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 CMASQ8NFW8 434 aaPredicted RBP11.94□□□□□ -0.5
RTN3-203ENST00000341307 OR6J1Q8NGC5 347 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 HTRA1Q92743 480 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 VCPIP1Q96JH7 1222 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 GLT1D1Q96MS3 346 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 SNX18Q96RF0 628 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 SERPINI1Q99574 410 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 TUBA1CQ9BQE3 449 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 SETD4Q9NVD3 440 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 SMOXQ9NWM0 555 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 ADPRHL2Q9NX46 363 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 DNPEPQ9ULA0 475 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 SHOC2Q9UQ13 582 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 A0A0G2JMP0 313 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 DLGAP1O14490 977 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 AIM2O14862 343 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 SNX2O60749 519 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 CPNE6O95741 557 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 ARF4P18085 180 aaPredicted RBP11.94□□□□□ -0.5
RTN3-203ENST00000341307 NCF2P19878 526 aaPredicted RBP11.94□□□□□ -0.5
RTN3-203ENST00000341307 ARNTP27540 789 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 NUDT1P36639 197 aa11.94□□□□□ -0.5
RTN3-203ENST00000341307 MLLT3P42568 568 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms