RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 BTRCQ9Y297 605 aa14.51□□□□□ -0.09
CPSF7-201ENST00000340437 ANKRD6Q9Y2G4 727 aa14.51□□□□□ -0.09
CPSF7-201ENST00000340437 KCTD3Q9Y597 815 aa14.51□□□□□ -0.09
CPSF7-201ENST00000340437 PPP2R3BQ9Y5P8 575 aa14.51□□□□□ -0.09
CPSF7-201ENST00000340437 ARHGAP10A1A4S6 786 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 NCAM2O15394 837 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 SRP72O76094 671 aaKnown RBP14.5□□□□□ -0.09
CPSF7-201ENST00000340437 SIX3O95343 332 aaPredicted RBP14.5□□□□□ -0.09
CPSF7-201ENST00000340437 HMBSP08397 361 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 BRCC3P46736 316 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 VPS26BQ4G0F5 336 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 LINC00523Q86TU6 105 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 SPPL2BQ8TCT7 592 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 CNDP1Q96KN2 507 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 DERAQ9Y315 318 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 PCDHGA7Q9Y5G6 932 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 ATP5F1P24539 256 aaPredicted RBP14.5□□□□□ -0.09
CPSF7-201ENST00000340437 SCNN1GP51170 649 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 C9orf131Q5VYM1 1079 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 KLC3Q6P597 504 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 ZNF419Q96HQ0 510 aaPredicted RBP14.5□□□□□ -0.09
CPSF7-201ENST00000340437 GLOD4Q9HC38 313 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 CROTQ9UKG9 612 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 AAR2Q9Y312 384 aaKnown RBP14.5□□□□□ -0.09
CPSF7-201ENST00000340437 PDHXO00330 501 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 CRCPO75575 148 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 B3GAT3O94766 335 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 HLA-DQB2P05538 268 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 BTBD8Q5XKL5 378 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 AFAP1L2Q8N4X5 818 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 DCBLD1Q8N8Z6 715 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 ANKRD49Q8WVL7 239 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 SOX17Q9H6I2 414 aaPredicted RBP14.5□□□□□ -0.09
CPSF7-201ENST00000340437 VTA1Q9NP79 307 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 NDUFA13Q9P0J0 144 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 NOD1Q9Y239 953 aa14.5□□□□□ -0.09
CPSF7-201ENST00000340437 GOLGA8CPA6NN73 597 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 SLCO1B7G3V0H7 640 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 MTSS1O43312 755 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 SNRPB2P08579 225 aaKnown RBP14.49□□□□□ -0.09
CPSF7-201ENST00000340437 CA8P35219 290 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 GALNT2Q10471 571 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 DHFR2Q86XF0 187 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 CLVS1Q8IUQ0 354 aaPredicted RBP14.49□□□□□ -0.09
CPSF7-201ENST00000340437 SH3RF2Q8TEC5 729 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 SLC16A10Q8TF71 515 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 SLC2A13Q96QE2 648 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 TMEM209Q96SK2 561 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 CCDC28BQ9BUN5 200 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 GDAP2Q9NXN4 497 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 CACNA2D2Q9NY47 1150 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 ERI2A8K979 691 aaKnown RBP14.49□□□□□ -0.09
CPSF7-201ENST00000340437 A8MT66 165 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 FBP2O00757 339 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 PTGESO14684 152 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 ACOT8O14734 319 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 TRMUO75648 421 aaKnown RBP14.49□□□□□ -0.09
CPSF7-201ENST00000340437 PAMP19021 973 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 SLC5A2P31639 672 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 ALKAL1Q6UXT8 129 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 TMEM102Q8N9M5 508 aaPredicted RBP14.49□□□□□ -0.09
CPSF7-201ENST00000340437 DQX1Q8TE96 717 aaKnown RBP14.49□□□□□ -0.09
CPSF7-201ENST00000340437 MYLPFQ96A32 169 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 KCNA7Q96RP8 456 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 MRPL57Q9BQC6 102 aaKnown RBP14.49□□□□□ -0.09
CPSF7-201ENST00000340437 UPF3AQ9H1J1 476 aaKnown RBP14.49□□□□□ -0.09
CPSF7-201ENST00000340437 PTTG2Q9NZH5 202 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 RNF11Q9Y3C5 154 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 TRAF6Q9Y4K3 522 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 TTC3P53804 2025 aa14.49□□□□□ -0.09
CPSF7-201ENST00000340437 STRNO43815 780 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 TMCC1O94876 653 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 CD86P42081 329 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 IKBKEQ14164 716 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 TBCELQ5QJ74 424 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 SMG8Q8ND04 991 aaKnown RBP14.48□□□□□ -0.09
CPSF7-201ENST00000340437 C3orf58Q8NDZ4 430 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 ZFRQ96KR1 1074 aaKnown RBP14.48□□□□□ -0.09
CPSF7-201ENST00000340437 FCRL2Q96LA5 508 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-201ENST00000340437 KIFC1Q9BW19 673 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 MIOSQ9NXC5 875 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 TDRKHQ9Y2W6 561 aaKnown RBP14.48□□□□□ -0.09
CPSF7-201ENST00000340437 PRSS51A0A1B0GVH4 220 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 ANKRD33BA6NCL7 494 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 PAGE1O75459 146 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 ANXA9O76027 345 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 GNAO1P09471 354 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 OR4Q2P0C623 313 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 ARNTP27540 789 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 PGFP49763 221 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 NR1H2P55055 460 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 WNT3AP56704 352 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 ECT2LQ008S8 904 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 NSUN2Q08J23 767 aaKnown RBP eCLIP14.48□□□□□ -0.09
CPSF7-201ENST00000340437 AGAP9Q5VTM2 703 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 CHST15Q7LFX5 561 aaPredicted RBP14.48□□□□□ -0.09
CPSF7-201ENST00000340437 PIWIL4Q7Z3Z4 852 aaKnown RBP14.48□□□□□ -0.09
CPSF7-201ENST00000340437 OFCC1Q8IZS5 231 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 DNAJB14Q8TBM8 379 aa14.48□□□□□ -0.09
CPSF7-201ENST00000340437 NCSTNQ92542 709 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms