RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 LRRC26Q2I0M4 334 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 TMEM198Q66K66 360 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 DENND5AQ6IQ26 1287 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 KYAT3Q6YP21 454 aaKnown RBP10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 RINLQ6ZS11 566 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 EP400NLQ6ZTU2 488 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 SH2D5Q6ZV89 423 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 SPRED2Q7Z698 418 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 TREML1Q86YW5 311 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 NAT16Q8N8M0 369 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 ZNF461Q8TAF7 563 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 PIWIL2Q8TC59 973 aaKnown RBP10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 SKA2Q8WVK7 121 aaPredicted RBP10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 TMA16Q96EY4 203 aaKnown RBP10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 CATSPER2Q96P56 530 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 RAB3IPQ96QF0 476 aaPredicted RBP10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 GATA5Q9BWX5 397 aaPredicted RBP10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 RHOJQ9H4E5 214 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 POMKQ9H5K3 350 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 CFAP97Q9P2B7 532 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 PLA2G4CQ9UP65 541 aa10.25□□□□□ -0.77
RBFOX1-202ENST00000340209 THSD7BQ9C0I4 1608 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 STC2O76061 302 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 MSX2P35548 267 aaPredicted RBP10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 MAGEA11P43364 429 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 ABCE1P61221 599 aaKnown RBP10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 CACUL1Q86Y37 369 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 MYLK4Q86YV6 388 aaPredicted RBP10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 MFN1Q8IWA4 741 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 ZNF276Q8N554 614 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 HEXDCQ8WVB3 486 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 APBB2Q92870 758 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 NSL1Q96IY1 281 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 TMEM248Q9NWD8 314 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 HCFC1R1Q9NWW0 138 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 CLIC5Q9NZA1 410 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 AGO1Q9UL18 857 aaKnown RBP10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 RAD54BQ9Y620 910 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 TMEM189-UBE2V1I3L0A0 370 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 PSMD3O43242 534 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 RFPL2O75678 378 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 ALDH1A2O94788 518 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 SUPT7LO94864 414 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 GOT2P00505 430 aaKnown RBP10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 ALPIP09923 528 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 PGM1P36871 562 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 CDKN1CP49918 316 aaPredicted RBP10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 RASSF2P50749 326 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 SERINC3Q13530 473 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 MANEALQ5VSG8 457 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 MBLAC2Q68D91 279 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 SH3RF2Q8TEC5 729 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 PRICKLE1Q96MT3 831 aaPredicted RBP10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 UBE2OQ9C0C9 1292 aaKnown RBP10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 TLE6Q9H808 572 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 ZNF334Q9HCZ1 680 aaPredicted RBP10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 SSU72Q9NP77 194 aaKnown RBP10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 SPG21Q9NZD8 308 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 PRKAG2Q9UGJ0 569 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 MAGEB16A2A368 324 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 C9JVG2 144 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 AIM2O14862 343 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 INPPL1O15357 1258 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 TRIM13O60858 407 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 DHRS4L1P0CG22 281 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 ARRB2P32121 409 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 PSEN1P49768 467 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 RAB10P61026 200 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 PDAP1Q13442 181 aaKnown RBP10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 CBX2Q14781 532 aaPredicted RBP10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 UGP2Q16851 508 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 MFSD6LQ8IWD5 586 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 SLC43A3Q8NBI5 491 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 STMN2Q93045 179 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 OLFM1Q99784 485 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 KCNK13Q9HB14 408 aa10.24□□□□□ -0.77
RBFOX1-202ENST00000340209 CCDC162PA2VCL2 907 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 SPECC1L-ADORA2AF8WAN1 911 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 PER2O15055 1255 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 RHOBTB1O94844 696 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 CXCL14O95715 111 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 GLP2RO95838 553 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 GFAPP14136 432 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 TCN1P20061 433 aaPredicted RBP10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 SLC12A1Q13621 1099 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 SH2D4BQ5SQS7 431 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 TSTD2Q5T7W7 516 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 MRPS31Q92665 395 aaKnown RBP10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 GPR63Q9BZJ6 419 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 MTRRQ9UBK8 725 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 SDK1Q7Z5N4 2213 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 NDUFS3O75489 264 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 CRCPO75575 148 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 RASSF9O75901 435 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 TFEBP19484 476 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 HADHAP40939 763 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 CCNFP41002 786 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 ZNF135P52742 658 aaPredicted RBP10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 OCRLQ01968 901 aa10.23□□□□□ -0.77
RBFOX1-202ENST00000340209 LRRC36Q1X8D7 754 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms