RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 POLR1EQ9GZS1 481 aaKnown RBP15.4■□□□□ 0.06
UBE3B-201ENST00000340074 KCNF1Q9H3M0 494 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 TM9SF3Q9HD45 589 aa15.4■□□□□ 0.06
UBE3B-201ENST00000340074 TPX2Q9ULW0 747 aaKnown RBP15.4■□□□□ 0.06
UBE3B-201ENST00000340074 ZFR2Q9UPR6 939 aaKnown RBP15.4■□□□□ 0.06
UBE3B-201ENST00000340074 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.39■□□□□ 0.05
UBE3B-201ENST00000340074 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.39■□□□□ 0.05
UBE3B-201ENST00000340074 PRR5-ARHGAP8B1AHC4 643 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 NEMP1O14524 444 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 TRAFD1O14545 582 aaPredicted RBP15.39■□□□□ 0.05
UBE3B-201ENST00000340074 AREL1O15033 823 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 JCHAINP01591 159 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 HLA-DQB2P05538 268 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 ENGP17813 658 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 ITIH2P19823 946 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 PTPN7P35236 360 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 AFF3P51826 1226 aaKnown RBP15.39■□□□□ 0.05
UBE3B-201ENST00000340074 ZBTB17Q13105 803 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 ZNF211Q13398 564 aaPredicted RBP15.39■□□□□ 0.05
UBE3B-201ENST00000340074 UGP2Q16851 508 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 ZNF284Q2VY69 593 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 BRAT1Q6PJG6 821 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 LAYNQ6UX15 382 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 BBS12Q6ZW61 710 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 HORMAD1Q86X24 394 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 TFB1MQ8WVM0 346 aaKnown RBP15.39■□□□□ 0.05
UBE3B-201ENST00000340074 ECHDC3Q96DC8 303 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 SERAC1Q96JX3 654 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 SLC6A18Q96N87 628 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 IL12RB2Q99665 862 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 EDEM2Q9BV94 578 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 CEP41Q9BYV8 373 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 AMACRQ9UHK6 382 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 EFR3BQ9Y2G0 817 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 PCDHGC4Q9Y5F7 938 aa15.39■□□□□ 0.05
UBE3B-201ENST00000340074 ASCC3Q8N3C0 2202 aaKnown RBP15.39■□□□□ 0.05
UBE3B-201ENST00000340074 CEP250Q9BV73 2442 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 TDRD6O60522 2096 aaKnown RBP15.38■□□□□ 0.05
UBE3B-201ENST00000340074 UPK3BL1B0FP48 263 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 UPK3BL2E5RIL1 263 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 APOC4-APOC2K7ER74 178 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 WNT9AO14904 365 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 TSPAN6O43657 245 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 APOC2P02655 101 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 PRLRP16471 622 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 XPAP23025 273 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-201ENST00000340074 CETN2P41208 172 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 CSNK1EP49674 416 aaKnown RBP15.38■□□□□ 0.05
UBE3B-201ENST00000340074 RPS21P63220 83 aaKnown RBP15.38■□□□□ 0.05
UBE3B-201ENST00000340074 RACK1P63244 317 aaKnown RBP15.38■□□□□ 0.05
UBE3B-201ENST00000340074 IFI35P80217 286 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-201ENST00000340074 DSC2Q02487 901 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 PRKD1Q15139 912 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-201ENST00000340074 TMEM259Q4ZIN3 620 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 SETMARQ53H47 684 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-201ENST00000340074 RALGPS1Q5JS13 557 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 CCDC181Q5TID7 509 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 ALG1LQ6GMV1 187 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 KIAA1161Q6NSJ0 714 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 ZC3H18Q86VM9 953 aaKnown RBP15.38■□□□□ 0.05
UBE3B-201ENST00000340074 PAF1Q8N7H5 531 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 PDCD6IPQ8WUM4 868 aaKnown RBP15.38■□□□□ 0.05
UBE3B-201ENST00000340074 FEM1CQ96JP0 617 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 BRD8Q9H0E9 1235 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 HAUS2Q9NVX0 235 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 SEPT10Q9P0V9 454 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 ATP8A1Q9Y2Q0 1164 aa15.38■□□□□ 0.05
UBE3B-201ENST00000340074 ARHGAP33O14559 1287 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 SLC31A1O15431 190 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 HTRA2O43464 458 aaPredicted RBP15.37■□□□□ 0.05
UBE3B-201ENST00000340074 SOCS5O75159 536 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 PRKCGP05129 697 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 SYPP08247 313 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 NUDT1P36639 197 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 SUOXP51687 545 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 ARHGAP8P85298 464 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 SEMG2Q02383 582 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 TRAF2Q12933 501 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 GRIK2Q13002 908 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 IHHQ14623 411 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 CNTD1Q8N815 330 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 ARRDC2Q8TBH0 407 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 ALS2CR12Q96Q35 445 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 MYOCQ99972 504 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 GTPBP2Q9BX10 602 aaKnown RBP15.37■□□□□ 0.05
UBE3B-201ENST00000340074 PCDH12Q9NPG4 1184 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 AASDHPPTQ9NRN7 309 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 DMTF1Q9Y222 760 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 SPTBN4Q9H254 2564 aa15.37■□□□□ 0.05
UBE3B-201ENST00000340074 A0A1B0GVT2 93 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 IGLON5A6NGN9 336 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 CDX4O14627 284 aaPredicted RBP15.36■□□□□ 0.05
UBE3B-201ENST00000340074 RIOK3O14730 519 aaKnown RBP15.36■□□□□ 0.05
UBE3B-201ENST00000340074 TJP3O95049 919 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 CES1P23141 567 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 GRIA4P48058 902 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 POLR2LP62875 67 aaKnown RBP15.36■□□□□ 0.05
UBE3B-201ENST00000340074 BNC1Q01954 994 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 NIPAL4Q0D2K0 466 aa15.36■□□□□ 0.05
UBE3B-201ENST00000340074 ELP6Q0PNE2 266 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms